Gene : orange1.1g014913m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  109
Name:  ? orange1.1g014913m.g Secondary Identifier:  ? PAC:18118132
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g014913m.g 0.5kb upstream 0.5kb upstream 1903 true scaffold00018: 761163-763065 Citrus sinensis
orange1.1g014913m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00018: 761163-761662 Citrus sinensis
orange1.1g014913m.g 0.5kb downstream 0.5kb downstream 1903 true scaffold00018: 761663-763565 Citrus sinensis
orange1.1g014913m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00018: 763066-763565 Citrus sinensis
orange1.1g014913m.g 1.0kb upstream 1.0kb upstream 2403 true scaffold00018: 760663-763065 Citrus sinensis
orange1.1g014913m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00018: 760663-761662 Citrus sinensis
orange1.1g014913m.g 1.0kb downstream 1.0kb downstream 2403 true scaffold00018: 761663-764065 Citrus sinensis
orange1.1g014913m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00018: 763066-764065 Citrus sinensis
orange1.1g014913m.g 2.0kb upstream 2.0kb upstream 3403 true scaffold00018: 759663-763065 Citrus sinensis
orange1.1g014913m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00018: 759663-761662 Citrus sinensis
orange1.1g014913m.g 2.0kb downstream 2.0kb downstream 3403 true scaffold00018: 761663-765065 Citrus sinensis
orange1.1g014913m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00018: 763066-765065 Citrus sinensis
orange1.1g014913m.g 5.0kb upstream 5.0kb upstream 6403 true scaffold00018: 756663-763065 Citrus sinensis
orange1.1g014913m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00018: 756663-761662 Citrus sinensis
orange1.1g014913m.g 5.0kb downstream 5.0kb downstream 6403 true scaffold00018: 761663-768065 Citrus sinensis
orange1.1g014913m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00018: 763066-768065 Citrus sinensis
orange1.1g014913m.g 10.0kb upstream 10.0kb upstream 11403 true scaffold00018: 751663-763065 Citrus sinensis
orange1.1g014913m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00018: 751663-761662 Citrus sinensis
orange1.1g014913m.g 10.0kb downstream 10.0kb downstream 11403 true scaffold00018: 761663-773065 Citrus sinensis
orange1.1g014913m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00018: 763066-773065 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350441 5266 SBM View MSA
124240092 5268 Malvidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain