Gene : orange1.1g014817m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  29
Name:  ? orange1.1g014817m.g Secondary Identifier:  ? PAC:18100164
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g014817m.g 0.5kb upstream 0.5kb upstream 2407 true scaffold00065: 251236-253642 Citrus sinensis
orange1.1g014817m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00065: 251236-251735 Citrus sinensis
orange1.1g014817m.g 0.5kb downstream 0.5kb downstream 2407 true scaffold00065: 251736-254142 Citrus sinensis
orange1.1g014817m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00065: 253643-254142 Citrus sinensis
orange1.1g014817m.g 1.0kb upstream 1.0kb upstream 2907 true scaffold00065: 250736-253642 Citrus sinensis
orange1.1g014817m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00065: 250736-251735 Citrus sinensis
orange1.1g014817m.g 1.0kb downstream 1.0kb downstream 2907 true scaffold00065: 251736-254642 Citrus sinensis
orange1.1g014817m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00065: 253643-254642 Citrus sinensis
orange1.1g014817m.g 2.0kb upstream 2.0kb upstream 3907 true scaffold00065: 249736-253642 Citrus sinensis
orange1.1g014817m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00065: 249736-251735 Citrus sinensis
orange1.1g014817m.g 2.0kb downstream 2.0kb downstream 3907 true scaffold00065: 251736-255642 Citrus sinensis
orange1.1g014817m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00065: 253643-255642 Citrus sinensis
orange1.1g014817m.g 5.0kb upstream 5.0kb upstream 6907 true scaffold00065: 246736-253642 Citrus sinensis
orange1.1g014817m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00065: 246736-251735 Citrus sinensis
orange1.1g014817m.g 5.0kb downstream 5.0kb downstream 6907 true scaffold00065: 251736-258642 Citrus sinensis
orange1.1g014817m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00065: 253643-258642 Citrus sinensis
orange1.1g014817m.g 10.0kb upstream 10.0kb upstream 11907 true scaffold00065: 241736-253642 Citrus sinensis
orange1.1g014817m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00065: 241736-251735 Citrus sinensis
orange1.1g014817m.g 10.0kb downstream 10.0kb downstream 11907 true scaffold00065: 251736-263642 Citrus sinensis
orange1.1g014817m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00065: 253643-263642 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342349 5266 SBM View MSA
124246737 5268 Malvidae View MSA
124065727 5270 Rosid View MSA
123740066 5271 Pentapetalae View MSA
122793707 5272 Eudicot View MSA
122045522 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain