Gene : Carub.0003s1149 C. rubella v1.1
Defline:  (1 of 2) PTHR33432//PTHR33432:SF6 - FAMILY NOT NAMED // EMSY N TERMINUS AND PLANT TUDOR-LIKE DOMAIN-CONTAINING PROTEIN Genomic Order:  1149
Name:  ? Carub.0003s1149 Secondary Identifier:  ? PAC:39240599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1149 0.5kb upstream 0.5kb upstream 3976 true scaffold_3: 3961645-3965620 Capsella rubella
Carub.0003s1149 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3965121-3965620 Capsella rubella
Carub.0003s1149 0.5kb downstream 0.5kb downstream 3976 true scaffold_3: 3961145-3965120 Capsella rubella
Carub.0003s1149 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3961145-3961644 Capsella rubella
Carub.0003s1149 1.0kb upstream 1.0kb upstream 4476 true scaffold_3: 3961645-3966120 Capsella rubella
Carub.0003s1149 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3965121-3966120 Capsella rubella
Carub.0003s1149 1.0kb downstream 1.0kb downstream 4476 true scaffold_3: 3960645-3965120 Capsella rubella
Carub.0003s1149 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3960645-3961644 Capsella rubella
Carub.0003s1149 2.0kb upstream 2.0kb upstream 5476 true scaffold_3: 3961645-3967120 Capsella rubella
Carub.0003s1149 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3965121-3967120 Capsella rubella
Carub.0003s1149 2.0kb downstream 2.0kb downstream 5476 true scaffold_3: 3959645-3965120 Capsella rubella
Carub.0003s1149 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3959645-3961644 Capsella rubella
Carub.0003s1149 5.0kb upstream 5.0kb upstream 8476 true scaffold_3: 3961645-3970120 Capsella rubella
Carub.0003s1149 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3965121-3970120 Capsella rubella
Carub.0003s1149 5.0kb downstream 5.0kb downstream 8476 true scaffold_3: 3956645-3965120 Capsella rubella
Carub.0003s1149 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3956645-3961644 Capsella rubella
Carub.0003s1149 10.0kb upstream 10.0kb upstream 13476 true scaffold_3: 3961645-3975120 Capsella rubella
Carub.0003s1149 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3965121-3975120 Capsella rubella
Carub.0003s1149 10.0kb downstream 10.0kb downstream 13476 true scaffold_3: 3951645-3965120 Capsella rubella
Carub.0003s1149 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3951645-3961644 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031240 5273 Angiosperm View MSA
122373816 5261 Brassicaceae View MSA
123841351 5264 Brassicales-Malvales View MSA
124349179 5266 SBM View MSA
124250889 5268 Malvidae View MSA
124050785 5270 Rosid View MSA
123647529 5271 Pentapetalae View MSA
122681499 5272 Eudicot View MSA
121351011 5274 Embryophyte View MSA
123428685 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain