Gene : Carub.0003s1213 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1213
Name:  ? Carub.0003s1213 Secondary Identifier:  ? PAC:39241822
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1213 0.5kb upstream 0.5kb upstream 2676 true scaffold_3: 4156633-4159308 Capsella rubella
Carub.0003s1213 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4158809-4159308 Capsella rubella
Carub.0003s1213 0.5kb downstream 0.5kb downstream 2676 true scaffold_3: 4156133-4158808 Capsella rubella
Carub.0003s1213 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4156133-4156632 Capsella rubella
Carub.0003s1213 1.0kb upstream 1.0kb upstream 3176 true scaffold_3: 4156633-4159808 Capsella rubella
Carub.0003s1213 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4158809-4159808 Capsella rubella
Carub.0003s1213 1.0kb downstream 1.0kb downstream 3176 true scaffold_3: 4155633-4158808 Capsella rubella
Carub.0003s1213 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4155633-4156632 Capsella rubella
Carub.0003s1213 2.0kb upstream 2.0kb upstream 4176 true scaffold_3: 4156633-4160808 Capsella rubella
Carub.0003s1213 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4158809-4160808 Capsella rubella
Carub.0003s1213 2.0kb downstream 2.0kb downstream 4176 true scaffold_3: 4154633-4158808 Capsella rubella
Carub.0003s1213 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4154633-4156632 Capsella rubella
Carub.0003s1213 5.0kb upstream 5.0kb upstream 7176 true scaffold_3: 4156633-4163808 Capsella rubella
Carub.0003s1213 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4158809-4163808 Capsella rubella
Carub.0003s1213 5.0kb downstream 5.0kb downstream 7176 true scaffold_3: 4151633-4158808 Capsella rubella
Carub.0003s1213 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4151633-4156632 Capsella rubella
Carub.0003s1213 10.0kb upstream 10.0kb upstream 12176 true scaffold_3: 4156633-4168808 Capsella rubella
Carub.0003s1213 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4158809-4168808 Capsella rubella
Carub.0003s1213 10.0kb downstream 10.0kb downstream 12176 true scaffold_3: 4146633-4158808 Capsella rubella
Carub.0003s1213 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4146633-4156632 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369566 5261 Brassicaceae View MSA
123831781 5264 Brassicales-Malvales View MSA
124321746 5266 SBM View MSA
124238283 5268 Malvidae View MSA
124063549 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain