Gene : Carub.0003s0787 C. rubella v1.1

Defline:  (1 of 1) K02356 - elongation factor P (efp) Genomic Order:  787
Name:  ? Carub.0003s0787 Secondary Identifier:  ? PAC:39242235

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0787 0.5kb upstream 0.5kb upstream 2101 true scaffold_3: 2701751-2703851 Capsella rubella
Carub.0003s0787 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2703352-2703851 Capsella rubella
Carub.0003s0787 0.5kb downstream 0.5kb downstream 2101 true scaffold_3: 2701251-2703351 Capsella rubella
Carub.0003s0787 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2701251-2701750 Capsella rubella
Carub.0003s0787 1.0kb upstream 1.0kb upstream 2601 true scaffold_3: 2701751-2704351 Capsella rubella
Carub.0003s0787 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2703352-2704351 Capsella rubella
Carub.0003s0787 1.0kb downstream 1.0kb downstream 2601 true scaffold_3: 2700751-2703351 Capsella rubella
Carub.0003s0787 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2700751-2701750 Capsella rubella
Carub.0003s0787 2.0kb upstream 2.0kb upstream 3601 true scaffold_3: 2701751-2705351 Capsella rubella
Carub.0003s0787 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2703352-2705351 Capsella rubella
Carub.0003s0787 2.0kb downstream 2.0kb downstream 3601 true scaffold_3: 2699751-2703351 Capsella rubella
Carub.0003s0787 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2699751-2701750 Capsella rubella
Carub.0003s0787 5.0kb upstream 5.0kb upstream 6601 true scaffold_3: 2701751-2708351 Capsella rubella
Carub.0003s0787 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2703352-2708351 Capsella rubella
Carub.0003s0787 5.0kb downstream 5.0kb downstream 6601 true scaffold_3: 2696751-2703351 Capsella rubella
Carub.0003s0787 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2696751-2701750 Capsella rubella
Carub.0003s0787 10.0kb upstream 10.0kb upstream 11601 true scaffold_3: 2701751-2713351 Capsella rubella
Carub.0003s0787 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2703352-2713351 Capsella rubella
Carub.0003s0787 10.0kb downstream 10.0kb downstream 11601 true scaffold_3: 2691751-2703351 Capsella rubella
Carub.0003s0787 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2691751-2701750 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362036 5261 Brassicaceae View MSA
123838559 5264 Brassicales-Malvales View MSA
124336673 5266 SBM View MSA
124238667 5268 Malvidae View MSA
124067724 5270 Rosid View MSA
123738931 5271 Pentapetalae View MSA
122789538 5272 Eudicot View MSA
122051510 5273 Angiosperm View MSA
121347345 5274 Embryophyte View MSA
123424551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain