Gene : Carub.0003s0876 C. rubella v1.1

Defline:  (1 of 1) PTHR22981:SF71 - PWWP DOMAIN-CONTAINING PROTEIN Genomic Order:  876
Name:  ? Carub.0003s0876 Secondary Identifier:  ? PAC:39242432

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0876 0.5kb upstream 0.5kb upstream 2684 true scaffold_3: 2995195-2997878 Capsella rubella
Carub.0003s0876 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2995195-2995694 Capsella rubella
Carub.0003s0876 0.5kb downstream 0.5kb downstream 2684 true scaffold_3: 2995695-2998378 Capsella rubella
Carub.0003s0876 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2997879-2998378 Capsella rubella
Carub.0003s0876 1.0kb upstream 1.0kb upstream 3184 true scaffold_3: 2994695-2997878 Capsella rubella
Carub.0003s0876 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2994695-2995694 Capsella rubella
Carub.0003s0876 1.0kb downstream 1.0kb downstream 3184 true scaffold_3: 2995695-2998878 Capsella rubella
Carub.0003s0876 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2997879-2998878 Capsella rubella
Carub.0003s0876 2.0kb upstream 2.0kb upstream 4184 true scaffold_3: 2993695-2997878 Capsella rubella
Carub.0003s0876 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2993695-2995694 Capsella rubella
Carub.0003s0876 2.0kb downstream 2.0kb downstream 4184 true scaffold_3: 2995695-2999878 Capsella rubella
Carub.0003s0876 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2997879-2999878 Capsella rubella
Carub.0003s0876 5.0kb upstream 5.0kb upstream 7184 true scaffold_3: 2990695-2997878 Capsella rubella
Carub.0003s0876 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2990695-2995694 Capsella rubella
Carub.0003s0876 5.0kb downstream 5.0kb downstream 7184 true scaffold_3: 2995695-3002878 Capsella rubella
Carub.0003s0876 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2997879-3002878 Capsella rubella
Carub.0003s0876 10.0kb upstream 10.0kb upstream 12184 true scaffold_3: 2985695-2997878 Capsella rubella
Carub.0003s0876 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2985695-2995694 Capsella rubella
Carub.0003s0876 10.0kb downstream 10.0kb downstream 12184 true scaffold_3: 2995695-3007878 Capsella rubella
Carub.0003s0876 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2997879-3007878 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343245 5261 Brassicaceae View MSA
123783501 5264 Brassicales-Malvales View MSA
124281731 5266 SBM View MSA
124251162 5268 Malvidae View MSA
124071985 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain