Gene : Carub.0003s0872 C. rubella v1.1

Defline:  (1 of 2) K02930 - large subunit ribosomal protein L4e (RP-L4e, RPL4) Genomic Order:  872
Name:  ? Carub.0003s0872 Secondary Identifier:  ? PAC:39241504

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0872 0.5kb upstream 0.5kb upstream 2243 true scaffold_3: 2982274-2984516 Capsella rubella
Carub.0003s0872 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2982274-2982773 Capsella rubella
Carub.0003s0872 0.5kb downstream 0.5kb downstream 2243 true scaffold_3: 2982774-2985016 Capsella rubella
Carub.0003s0872 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2984517-2985016 Capsella rubella
Carub.0003s0872 1.0kb upstream 1.0kb upstream 2743 true scaffold_3: 2981774-2984516 Capsella rubella
Carub.0003s0872 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2981774-2982773 Capsella rubella
Carub.0003s0872 1.0kb downstream 1.0kb downstream 2743 true scaffold_3: 2982774-2985516 Capsella rubella
Carub.0003s0872 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2984517-2985516 Capsella rubella
Carub.0003s0872 2.0kb upstream 2.0kb upstream 3743 true scaffold_3: 2980774-2984516 Capsella rubella
Carub.0003s0872 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2980774-2982773 Capsella rubella
Carub.0003s0872 2.0kb downstream 2.0kb downstream 3743 true scaffold_3: 2982774-2986516 Capsella rubella
Carub.0003s0872 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2984517-2986516 Capsella rubella
Carub.0003s0872 5.0kb upstream 5.0kb upstream 6743 true scaffold_3: 2977774-2984516 Capsella rubella
Carub.0003s0872 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2977774-2982773 Capsella rubella
Carub.0003s0872 5.0kb downstream 5.0kb downstream 6743 true scaffold_3: 2982774-2989516 Capsella rubella
Carub.0003s0872 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2984517-2989516 Capsella rubella
Carub.0003s0872 10.0kb upstream 10.0kb upstream 11743 true scaffold_3: 2972774-2984516 Capsella rubella
Carub.0003s0872 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2972774-2982773 Capsella rubella
Carub.0003s0872 10.0kb downstream 10.0kb downstream 11743 true scaffold_3: 2982774-2994516 Capsella rubella
Carub.0003s0872 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2984517-2994516 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378751 5261 Brassicaceae View MSA
123838506 5264 Brassicales-Malvales View MSA
124338164 5266 SBM View MSA
124247751 5268 Malvidae View MSA
124063990 5270 Rosid View MSA
123739316 5271 Pentapetalae View MSA
122788989 5272 Eudicot View MSA
122046079 5273 Angiosperm View MSA
121350172 5274 Embryophyte View MSA
123424794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain