Gene : Carub.0003s0688 C. rubella v1.1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF154 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH62-RELATED Genomic Order:  688
Name:  ? Carub.0003s0688 Secondary Identifier:  ? PAC:39240037
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0688 0.5kb upstream 0.5kb upstream 3143 true scaffold_3: 2369566-2372708 Capsella rubella
Carub.0003s0688 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2372209-2372708 Capsella rubella
Carub.0003s0688 0.5kb downstream 0.5kb downstream 3143 true scaffold_3: 2369066-2372208 Capsella rubella
Carub.0003s0688 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2369066-2369565 Capsella rubella
Carub.0003s0688 1.0kb upstream 1.0kb upstream 3643 true scaffold_3: 2369566-2373208 Capsella rubella
Carub.0003s0688 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2372209-2373208 Capsella rubella
Carub.0003s0688 1.0kb downstream 1.0kb downstream 3643 true scaffold_3: 2368566-2372208 Capsella rubella
Carub.0003s0688 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2368566-2369565 Capsella rubella
Carub.0003s0688 2.0kb upstream 2.0kb upstream 4643 true scaffold_3: 2369566-2374208 Capsella rubella
Carub.0003s0688 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2372209-2374208 Capsella rubella
Carub.0003s0688 2.0kb downstream 2.0kb downstream 4643 true scaffold_3: 2367566-2372208 Capsella rubella
Carub.0003s0688 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2367566-2369565 Capsella rubella
Carub.0003s0688 5.0kb upstream 5.0kb upstream 7643 true scaffold_3: 2369566-2377208 Capsella rubella
Carub.0003s0688 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2372209-2377208 Capsella rubella
Carub.0003s0688 5.0kb downstream 5.0kb downstream 7643 true scaffold_3: 2364566-2372208 Capsella rubella
Carub.0003s0688 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2364566-2369565 Capsella rubella
Carub.0003s0688 10.0kb upstream 10.0kb upstream 12643 true scaffold_3: 2369566-2382208 Capsella rubella
Carub.0003s0688 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2372209-2382208 Capsella rubella
Carub.0003s0688 10.0kb downstream 10.0kb downstream 12643 true scaffold_3: 2359566-2372208 Capsella rubella
Carub.0003s0688 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2359566-2369565 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372156 5261 Brassicaceae View MSA
123836206 5264 Brassicales-Malvales View MSA
124341093 5266 SBM View MSA
124253328 5268 Malvidae View MSA
124071713 5270 Rosid View MSA
123752095 5271 Pentapetalae View MSA
122794860 5272 Eudicot View MSA
122048155 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain