Gene : Carub.0003s0723 C. rubella v1.1

Defline:  (1 of 2) PTHR31717//PTHR31717:SF8 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-LIKE 10-RELATED Genomic Order:  723
Name:  ? Carub.0003s0723 Secondary Identifier:  ? PAC:39241449

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0723 0.5kb upstream 0.5kb upstream 3514 true scaffold_3: 2481662-2485175 Capsella rubella
Carub.0003s0723 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2481662-2482161 Capsella rubella
Carub.0003s0723 0.5kb downstream 0.5kb downstream 3514 true scaffold_3: 2482162-2485675 Capsella rubella
Carub.0003s0723 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2485176-2485675 Capsella rubella
Carub.0003s0723 1.0kb upstream 1.0kb upstream 4014 true scaffold_3: 2481162-2485175 Capsella rubella
Carub.0003s0723 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2481162-2482161 Capsella rubella
Carub.0003s0723 1.0kb downstream 1.0kb downstream 4014 true scaffold_3: 2482162-2486175 Capsella rubella
Carub.0003s0723 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2485176-2486175 Capsella rubella
Carub.0003s0723 2.0kb upstream 2.0kb upstream 5014 true scaffold_3: 2480162-2485175 Capsella rubella
Carub.0003s0723 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2480162-2482161 Capsella rubella
Carub.0003s0723 2.0kb downstream 2.0kb downstream 5014 true scaffold_3: 2482162-2487175 Capsella rubella
Carub.0003s0723 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2485176-2487175 Capsella rubella
Carub.0003s0723 5.0kb upstream 5.0kb upstream 8014 true scaffold_3: 2477162-2485175 Capsella rubella
Carub.0003s0723 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2477162-2482161 Capsella rubella
Carub.0003s0723 5.0kb downstream 5.0kb downstream 8014 true scaffold_3: 2482162-2490175 Capsella rubella
Carub.0003s0723 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2485176-2490175 Capsella rubella
Carub.0003s0723 10.0kb upstream 10.0kb upstream 13014 true scaffold_3: 2472162-2485175 Capsella rubella
Carub.0003s0723 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2472162-2482161 Capsella rubella
Carub.0003s0723 10.0kb downstream 10.0kb downstream 13014 true scaffold_3: 2482162-2495175 Capsella rubella
Carub.0003s0723 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2485176-2495175 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372759 5261 Brassicaceae View MSA
123839244 5264 Brassicales-Malvales View MSA
124351347 5266 SBM View MSA
124243820 5268 Malvidae View MSA
124060563 5270 Rosid View MSA
123751246 5271 Pentapetalae View MSA
122785793 5272 Eudicot View MSA
122049477 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350351 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain