Gene : Carub.0003s1246 C. rubella v1.1

Defline:  (1 of 1) PTHR11700//PTHR11700:SF9 - 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER // 37S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Genomic Order:  1246
Name:  ? Carub.0003s1246 Secondary Identifier:  ? PAC:39240758

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1246 0.5kb upstream 0.5kb upstream 2278 true scaffold_3: 4315615-4317892 Capsella rubella
Carub.0003s1246 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4317393-4317892 Capsella rubella
Carub.0003s1246 0.5kb downstream 0.5kb downstream 2278 true scaffold_3: 4315115-4317392 Capsella rubella
Carub.0003s1246 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4315115-4315614 Capsella rubella
Carub.0003s1246 1.0kb upstream 1.0kb upstream 2778 true scaffold_3: 4315615-4318392 Capsella rubella
Carub.0003s1246 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4317393-4318392 Capsella rubella
Carub.0003s1246 1.0kb downstream 1.0kb downstream 2778 true scaffold_3: 4314615-4317392 Capsella rubella
Carub.0003s1246 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4314615-4315614 Capsella rubella
Carub.0003s1246 2.0kb upstream 2.0kb upstream 3778 true scaffold_3: 4315615-4319392 Capsella rubella
Carub.0003s1246 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4317393-4319392 Capsella rubella
Carub.0003s1246 2.0kb downstream 2.0kb downstream 3778 true scaffold_3: 4313615-4317392 Capsella rubella
Carub.0003s1246 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4313615-4315614 Capsella rubella
Carub.0003s1246 5.0kb upstream 5.0kb upstream 6778 true scaffold_3: 4315615-4322392 Capsella rubella
Carub.0003s1246 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4317393-4322392 Capsella rubella
Carub.0003s1246 5.0kb downstream 5.0kb downstream 6778 true scaffold_3: 4310615-4317392 Capsella rubella
Carub.0003s1246 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4310615-4315614 Capsella rubella
Carub.0003s1246 10.0kb upstream 10.0kb upstream 11778 true scaffold_3: 4315615-4327392 Capsella rubella
Carub.0003s1246 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4317393-4327392 Capsella rubella
Carub.0003s1246 10.0kb downstream 10.0kb downstream 11778 true scaffold_3: 4305615-4317392 Capsella rubella
Carub.0003s1246 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4305615-4315614 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026497 5273 Angiosperm View MSA
122361273 5261 Brassicaceae View MSA
123839106 5264 Brassicales-Malvales View MSA
124342418 5266 SBM View MSA
124242735 5268 Malvidae View MSA
124068584 5270 Rosid View MSA
123745585 5271 Pentapetalae View MSA
122786929 5272 Eudicot View MSA
121343916 5274 Embryophyte View MSA
123426498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain