Gene : Carub.0003s1253 C. rubella v1.1
Defline:  (1 of 1) K03500 - 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] (rsmB, sun) Genomic Order:  1253
Name:  ? Carub.0003s1253 Secondary Identifier:  ? PAC:39239315
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1253 0.5kb upstream 0.5kb upstream 4265 true scaffold_3: 4332655-4336919 Capsella rubella
Carub.0003s1253 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4336420-4336919 Capsella rubella
Carub.0003s1253 0.5kb downstream 0.5kb downstream 4265 true scaffold_3: 4332155-4336419 Capsella rubella
Carub.0003s1253 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4332155-4332654 Capsella rubella
Carub.0003s1253 1.0kb upstream 1.0kb upstream 4765 true scaffold_3: 4332655-4337419 Capsella rubella
Carub.0003s1253 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4336420-4337419 Capsella rubella
Carub.0003s1253 1.0kb downstream 1.0kb downstream 4765 true scaffold_3: 4331655-4336419 Capsella rubella
Carub.0003s1253 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4331655-4332654 Capsella rubella
Carub.0003s1253 2.0kb upstream 2.0kb upstream 5765 true scaffold_3: 4332655-4338419 Capsella rubella
Carub.0003s1253 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4336420-4338419 Capsella rubella
Carub.0003s1253 2.0kb downstream 2.0kb downstream 5765 true scaffold_3: 4330655-4336419 Capsella rubella
Carub.0003s1253 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4330655-4332654 Capsella rubella
Carub.0003s1253 5.0kb upstream 5.0kb upstream 8765 true scaffold_3: 4332655-4341419 Capsella rubella
Carub.0003s1253 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4336420-4341419 Capsella rubella
Carub.0003s1253 5.0kb downstream 5.0kb downstream 8765 true scaffold_3: 4327655-4336419 Capsella rubella
Carub.0003s1253 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4327655-4332654 Capsella rubella
Carub.0003s1253 10.0kb upstream 10.0kb upstream 13765 true scaffold_3: 4332655-4346419 Capsella rubella
Carub.0003s1253 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4336420-4346419 Capsella rubella
Carub.0003s1253 10.0kb downstream 10.0kb downstream 13765 true scaffold_3: 4322655-4336419 Capsella rubella
Carub.0003s1253 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4322655-4332654 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360337 5261 Brassicaceae View MSA
123834901 5264 Brassicales-Malvales View MSA
124340893 5266 SBM View MSA
124243156 5268 Malvidae View MSA
124073549 5270 Rosid View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain