Gene : Carub.0003s0523 C. rubella v1.1
Defline:  (1 of 8) PTHR11945//PTHR11945:SF183 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  523
Name:  ? Carub.0003s0523 Secondary Identifier:  ? PAC:39241761
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0523 0.5kb upstream 0.5kb upstream 1433 true scaffold_3: 1779053-1780485 Capsella rubella
Carub.0003s0523 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1779986-1780485 Capsella rubella
Carub.0003s0523 0.5kb downstream 0.5kb downstream 1433 true scaffold_3: 1778553-1779985 Capsella rubella
Carub.0003s0523 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1778553-1779052 Capsella rubella
Carub.0003s0523 1.0kb upstream 1.0kb upstream 1933 true scaffold_3: 1779053-1780985 Capsella rubella
Carub.0003s0523 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1779986-1780985 Capsella rubella
Carub.0003s0523 1.0kb downstream 1.0kb downstream 1933 true scaffold_3: 1778053-1779985 Capsella rubella
Carub.0003s0523 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1778053-1779052 Capsella rubella
Carub.0003s0523 2.0kb upstream 2.0kb upstream 2933 true scaffold_3: 1779053-1781985 Capsella rubella
Carub.0003s0523 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1779986-1781985 Capsella rubella
Carub.0003s0523 2.0kb downstream 2.0kb downstream 2933 true scaffold_3: 1777053-1779985 Capsella rubella
Carub.0003s0523 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1777053-1779052 Capsella rubella
Carub.0003s0523 5.0kb upstream 5.0kb upstream 5933 true scaffold_3: 1779053-1784985 Capsella rubella
Carub.0003s0523 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1779986-1784985 Capsella rubella
Carub.0003s0523 5.0kb downstream 5.0kb downstream 5933 true scaffold_3: 1774053-1779985 Capsella rubella
Carub.0003s0523 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1774053-1779052 Capsella rubella
Carub.0003s0523 10.0kb upstream 10.0kb upstream 10933 true scaffold_3: 1779053-1789985 Capsella rubella
Carub.0003s0523 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1779986-1789985 Capsella rubella
Carub.0003s0523 10.0kb downstream 10.0kb downstream 10933 true scaffold_3: 1769053-1779985 Capsella rubella
Carub.0003s0523 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1769053-1779052 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378447 5261 Brassicaceae View MSA
123841143 5264 Brassicales-Malvales View MSA
124347196 5266 SBM View MSA
124250364 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain