Gene : Carub.0003s0775 C. rubella v1.1

Defline:  (1 of 2) PTHR11208//PTHR11208:SF59 - RNA-BINDING PROTEIN RELATED // SUBFAMILY NOT NAMED Genomic Order:  775
Name:  ? Carub.0003s0775 Secondary Identifier:  ? PAC:39242487

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0775 0.5kb upstream 0.5kb upstream 3511 true scaffold_3: 2666107-2669617 Capsella rubella
Carub.0003s0775 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2666107-2666606 Capsella rubella
Carub.0003s0775 0.5kb downstream 0.5kb downstream 3511 true scaffold_3: 2666607-2670117 Capsella rubella
Carub.0003s0775 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2669618-2670117 Capsella rubella
Carub.0003s0775 1.0kb upstream 1.0kb upstream 4011 true scaffold_3: 2665607-2669617 Capsella rubella
Carub.0003s0775 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2665607-2666606 Capsella rubella
Carub.0003s0775 1.0kb downstream 1.0kb downstream 4011 true scaffold_3: 2666607-2670617 Capsella rubella
Carub.0003s0775 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2669618-2670617 Capsella rubella
Carub.0003s0775 2.0kb upstream 2.0kb upstream 5011 true scaffold_3: 2664607-2669617 Capsella rubella
Carub.0003s0775 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2664607-2666606 Capsella rubella
Carub.0003s0775 2.0kb downstream 2.0kb downstream 5011 true scaffold_3: 2666607-2671617 Capsella rubella
Carub.0003s0775 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2669618-2671617 Capsella rubella
Carub.0003s0775 5.0kb upstream 5.0kb upstream 8011 true scaffold_3: 2661607-2669617 Capsella rubella
Carub.0003s0775 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2661607-2666606 Capsella rubella
Carub.0003s0775 5.0kb downstream 5.0kb downstream 8011 true scaffold_3: 2666607-2674617 Capsella rubella
Carub.0003s0775 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2669618-2674617 Capsella rubella
Carub.0003s0775 10.0kb upstream 10.0kb upstream 13011 true scaffold_3: 2656607-2669617 Capsella rubella
Carub.0003s0775 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2656607-2666606 Capsella rubella
Carub.0003s0775 10.0kb downstream 10.0kb downstream 13011 true scaffold_3: 2666607-2679617 Capsella rubella
Carub.0003s0775 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2669618-2679617 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370714 5261 Brassicaceae View MSA
123836230 5264 Brassicales-Malvales View MSA
124337389 5266 SBM View MSA
124240023 5268 Malvidae View MSA
124074646 5270 Rosid View MSA
123752463 5271 Pentapetalae View MSA
122791052 5272 Eudicot View MSA
122045750 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain