Gene : Araha.8175s0017 A. halleri v1.1

Defline:  (1 of 12) PTHR31589:SF17 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  17
Name:  ? Araha.8175s0017 Secondary Identifier:  ? PAC:28860842

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8175s0017 0.5kb upstream 0.5kb upstream 3629 true Scaffold8175: 51136-54764 Arabidopsis halleri
Araha.8175s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold8175: 51136-51635 Arabidopsis halleri
Araha.8175s0017 0.5kb downstream 0.5kb downstream 3629 true Scaffold8175: 51636-55264 Arabidopsis halleri
Araha.8175s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold8175: 54765-55264 Arabidopsis halleri
Araha.8175s0017 1.0kb upstream 1.0kb upstream 4129 true Scaffold8175: 50636-54764 Arabidopsis halleri
Araha.8175s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold8175: 50636-51635 Arabidopsis halleri
Araha.8175s0017 1.0kb downstream 1.0kb downstream 4129 true Scaffold8175: 51636-55764 Arabidopsis halleri
Araha.8175s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold8175: 54765-55764 Arabidopsis halleri
Araha.8175s0017 2.0kb upstream 2.0kb upstream 5129 true Scaffold8175: 49636-54764 Arabidopsis halleri
Araha.8175s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold8175: 49636-51635 Arabidopsis halleri
Araha.8175s0017 2.0kb downstream 2.0kb downstream 5129 true Scaffold8175: 51636-56764 Arabidopsis halleri
Araha.8175s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold8175: 54765-56764 Arabidopsis halleri
Araha.8175s0017 5.0kb upstream 5.0kb upstream 8129 true Scaffold8175: 46636-54764 Arabidopsis halleri
Araha.8175s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold8175: 46636-51635 Arabidopsis halleri
Araha.8175s0017 5.0kb downstream 5.0kb downstream 8129 true Scaffold8175: 51636-59764 Arabidopsis halleri
Araha.8175s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold8175: 54765-59764 Arabidopsis halleri
Araha.8175s0017 10.0kb upstream 10.0kb upstream 13129 true Scaffold8175: 41636-54764 Arabidopsis halleri
Araha.8175s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold8175: 41636-51635 Arabidopsis halleri
Araha.8175s0017 10.0kb downstream 10.0kb downstream 13129 true Scaffold8175: 51636-64764 Arabidopsis halleri
Araha.8175s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold8175: 54765-64764 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381411 5261 Brassicaceae View MSA
123803228 5264 Brassicales-Malvales View MSA
124300353 5266 SBM View MSA
124151552 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain