Gene : Araha.7320s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR11922//PTHR11922:SF37 - GMP SYNTHASE-RELATED Genomic Order:  1
Name:  ? Araha.7320s0001 Secondary Identifier:  ? PAC:28853480
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRPSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7320s0001 0.5kb upstream 0.5kb upstream 2594 true Scaffold7320: 1-2594 Arabidopsis halleri
Araha.7320s0001 0.5kb upstream 0.5kb upstream 40 false Scaffold7320: 1-40 Arabidopsis halleri
Araha.7320s0001 0.5kb downstream 0.5kb downstream 2594 true Scaffold7320: 41-2634 Arabidopsis halleri
Araha.7320s0001 0.5kb downstream 0.5kb downstream 40 false Scaffold7320: 2595-2634 Arabidopsis halleri
Araha.7320s0001 1.0kb upstream 1.0kb upstream 2594 true Scaffold7320: 1-2594 Arabidopsis halleri
Araha.7320s0001 1.0kb upstream 1.0kb upstream 40 false Scaffold7320: 1-40 Arabidopsis halleri
Araha.7320s0001 1.0kb downstream 1.0kb downstream 2594 true Scaffold7320: 41-2634 Arabidopsis halleri
Araha.7320s0001 1.0kb downstream 1.0kb downstream 40 false Scaffold7320: 2595-2634 Arabidopsis halleri
Araha.7320s0001 2.0kb upstream 2.0kb upstream 2594 true Scaffold7320: 1-2594 Arabidopsis halleri
Araha.7320s0001 2.0kb upstream 2.0kb upstream 40 false Scaffold7320: 1-40 Arabidopsis halleri
Araha.7320s0001 2.0kb downstream 2.0kb downstream 2594 true Scaffold7320: 41-2634 Arabidopsis halleri
Araha.7320s0001 2.0kb downstream 2.0kb downstream 40 false Scaffold7320: 2595-2634 Arabidopsis halleri
Araha.7320s0001 5.0kb upstream 5.0kb upstream 2594 true Scaffold7320: 1-2594 Arabidopsis halleri
Araha.7320s0001 5.0kb upstream 5.0kb upstream 40 false Scaffold7320: 1-40 Arabidopsis halleri
Araha.7320s0001 5.0kb downstream 5.0kb downstream 2594 true Scaffold7320: 41-2634 Arabidopsis halleri
Araha.7320s0001 5.0kb downstream 5.0kb downstream 40 false Scaffold7320: 2595-2634 Arabidopsis halleri
Araha.7320s0001 10.0kb upstream 10.0kb upstream 2594 true Scaffold7320: 1-2594 Arabidopsis halleri
Araha.7320s0001 10.0kb upstream 10.0kb upstream 40 false Scaffold7320: 1-40 Arabidopsis halleri
Araha.7320s0001 10.0kb downstream 10.0kb downstream 2594 true Scaffold7320: 41-2634 Arabidopsis halleri
Araha.7320s0001 10.0kb downstream 10.0kb downstream 40 false Scaffold7320: 2595-2634 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328137 5261 Brassicaceae View MSA
123769517 5264 Brassicales-Malvales View MSA
124268076 5266 SBM View MSA
124124335 5268 Malvidae View MSA
123853387 5270 Rosid View MSA
123439474 5271 Pentapetalae View MSA
122794235 5272 Eudicot View MSA
122041811 5273 Angiosperm View MSA
121344905 5274 Embryophyte View MSA
123424838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain