Gene : Araha.3331s0006 A. halleri v1.1

Defline:  (1 of 2) PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASE Genomic Order:  6
Name:  ? Araha.3331s0006 Secondary Identifier:  ? PAC:28838502

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3331s0006 0.5kb upstream 0.5kb upstream 4724 true Scaffold3331: 28273-32996 Arabidopsis halleri
Araha.3331s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3331: 28273-28772 Arabidopsis halleri
Araha.3331s0006 0.5kb downstream 0.5kb downstream 4724 true Scaffold3331: 28773-33496 Arabidopsis halleri
Araha.3331s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3331: 32997-33496 Arabidopsis halleri
Araha.3331s0006 1.0kb upstream 1.0kb upstream 5224 true Scaffold3331: 27773-32996 Arabidopsis halleri
Araha.3331s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3331: 27773-28772 Arabidopsis halleri
Araha.3331s0006 1.0kb downstream 1.0kb downstream 5224 true Scaffold3331: 28773-33996 Arabidopsis halleri
Araha.3331s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3331: 32997-33996 Arabidopsis halleri
Araha.3331s0006 2.0kb upstream 2.0kb upstream 6224 true Scaffold3331: 26773-32996 Arabidopsis halleri
Araha.3331s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3331: 26773-28772 Arabidopsis halleri
Araha.3331s0006 2.0kb downstream 2.0kb downstream 6224 true Scaffold3331: 28773-34996 Arabidopsis halleri
Araha.3331s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3331: 32997-34996 Arabidopsis halleri
Araha.3331s0006 5.0kb upstream 5.0kb upstream 9224 true Scaffold3331: 23773-32996 Arabidopsis halleri
Araha.3331s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3331: 23773-28772 Arabidopsis halleri
Araha.3331s0006 5.0kb downstream 5.0kb downstream 9224 true Scaffold3331: 28773-37996 Arabidopsis halleri
Araha.3331s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3331: 32997-37996 Arabidopsis halleri
Araha.3331s0006 10.0kb upstream 10.0kb upstream 14224 true Scaffold3331: 18773-32996 Arabidopsis halleri
Araha.3331s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3331: 18773-28772 Arabidopsis halleri
Araha.3331s0006 10.0kb downstream 10.0kb downstream 10286 true Scaffold3331: 28773-39058 Arabidopsis halleri
Araha.3331s0006 10.0kb downstream 10.0kb downstream 6062 false Scaffold3331: 32997-39058 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364447 5261 Brassicaceae View MSA
123836040 5264 Brassicales-Malvales View MSA
124344947 5266 SBM View MSA
124249633 5268 Malvidae View MSA
124066442 5270 Rosid View MSA
123745238 5271 Pentapetalae View MSA
122790232 5272 Eudicot View MSA
122045017 5273 Angiosperm View MSA
123429108 5275 Viridiplantae View MSA
121348362 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain