Gene : Araha.18828s0002 A. halleri v1.1
Defline:  (1 of 2) PTHR10774:SF80 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  2
Name:  ? Araha.18828s0002 Secondary Identifier:  ? PAC:28843124
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.18828s0002 0.5kb upstream 0.5kb upstream 4446 true Scaffold18828: 5096-9541 Arabidopsis halleri
Araha.18828s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold18828: 9042-9541 Arabidopsis halleri
Araha.18828s0002 0.5kb downstream 0.5kb downstream 4446 true Scaffold18828: 4596-9041 Arabidopsis halleri
Araha.18828s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold18828: 4596-5095 Arabidopsis halleri
Araha.18828s0002 1.0kb upstream 1.0kb upstream 4946 true Scaffold18828: 5096-10041 Arabidopsis halleri
Araha.18828s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold18828: 9042-10041 Arabidopsis halleri
Araha.18828s0002 1.0kb downstream 1.0kb downstream 4946 true Scaffold18828: 4096-9041 Arabidopsis halleri
Araha.18828s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold18828: 4096-5095 Arabidopsis halleri
Araha.18828s0002 2.0kb upstream 2.0kb upstream 5946 true Scaffold18828: 5096-11041 Arabidopsis halleri
Araha.18828s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold18828: 9042-11041 Arabidopsis halleri
Araha.18828s0002 2.0kb downstream 2.0kb downstream 5946 true Scaffold18828: 3096-9041 Arabidopsis halleri
Araha.18828s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold18828: 3096-5095 Arabidopsis halleri
Araha.18828s0002 5.0kb upstream 5.0kb upstream 6135 true Scaffold18828: 5096-11230 Arabidopsis halleri
Araha.18828s0002 5.0kb upstream 5.0kb upstream 2189 false Scaffold18828: 9042-11230 Arabidopsis halleri
Araha.18828s0002 5.0kb downstream 5.0kb downstream 8946 true Scaffold18828: 96-9041 Arabidopsis halleri
Araha.18828s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold18828: 96-5095 Arabidopsis halleri
Araha.18828s0002 10.0kb upstream 10.0kb upstream 6135 true Scaffold18828: 5096-11230 Arabidopsis halleri
Araha.18828s0002 10.0kb upstream 10.0kb upstream 2189 false Scaffold18828: 9042-11230 Arabidopsis halleri
Araha.18828s0002 10.0kb downstream 10.0kb downstream 9041 true Scaffold18828: 1-9041 Arabidopsis halleri
Araha.18828s0002 10.0kb downstream 10.0kb downstream 5095 false Scaffold18828: 1-5095 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121484272 5273 Angiosperm Singleton cluster - no MSA
122317987 5261 Brassicaceae Singleton cluster - no MSA
123759587 5264 Brassicales-Malvales Singleton cluster - no MSA
124258222 5266 SBM Singleton cluster - no MSA
124114845 5268 Malvidae Singleton cluster - no MSA
123844237 5270 Rosid Singleton cluster - no MSA
123430520 5271 Pentapetalae Singleton cluster - no MSA
122466141 5272 Eudicot Singleton cluster - no MSA
120757667 5274 Embryophyte Singleton cluster - no MSA
122800127 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain