Gene : Araha.13178s0017 A. halleri v1.1

Defline:  (1 of 2) PTHR13020:SF34 - UBX DOMAIN-CONTAINING PROTEIN 4 Genomic Order:  17
Name:  ? Araha.13178s0017 Secondary Identifier:  ? PAC:28847778

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13178s0017 0.5kb upstream 0.5kb upstream 4107 true Scaffold13178: 66184-70290 Arabidopsis halleri
Araha.13178s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold13178: 69791-70290 Arabidopsis halleri
Araha.13178s0017 0.5kb downstream 0.5kb downstream 4107 true Scaffold13178: 65684-69790 Arabidopsis halleri
Araha.13178s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold13178: 65684-66183 Arabidopsis halleri
Araha.13178s0017 1.0kb upstream 1.0kb upstream 4607 true Scaffold13178: 66184-70790 Arabidopsis halleri
Araha.13178s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold13178: 69791-70790 Arabidopsis halleri
Araha.13178s0017 1.0kb downstream 1.0kb downstream 4607 true Scaffold13178: 65184-69790 Arabidopsis halleri
Araha.13178s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold13178: 65184-66183 Arabidopsis halleri
Araha.13178s0017 2.0kb upstream 2.0kb upstream 5607 true Scaffold13178: 66184-71790 Arabidopsis halleri
Araha.13178s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold13178: 69791-71790 Arabidopsis halleri
Araha.13178s0017 2.0kb downstream 2.0kb downstream 5607 true Scaffold13178: 64184-69790 Arabidopsis halleri
Araha.13178s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold13178: 64184-66183 Arabidopsis halleri
Araha.13178s0017 5.0kb upstream 5.0kb upstream 7986 true Scaffold13178: 66184-74169 Arabidopsis halleri
Araha.13178s0017 5.0kb upstream 5.0kb upstream 4379 false Scaffold13178: 69791-74169 Arabidopsis halleri
Araha.13178s0017 5.0kb downstream 5.0kb downstream 8607 true Scaffold13178: 61184-69790 Arabidopsis halleri
Araha.13178s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold13178: 61184-66183 Arabidopsis halleri
Araha.13178s0017 10.0kb upstream 10.0kb upstream 7986 true Scaffold13178: 66184-74169 Arabidopsis halleri
Araha.13178s0017 10.0kb upstream 10.0kb upstream 4379 false Scaffold13178: 69791-74169 Arabidopsis halleri
Araha.13178s0017 10.0kb downstream 10.0kb downstream 13607 true Scaffold13178: 56184-69790 Arabidopsis halleri
Araha.13178s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold13178: 56184-66183 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362130 5261 Brassicaceae View MSA
123831007 5264 Brassicales-Malvales View MSA
124341921 5266 SBM View MSA
124240837 5268 Malvidae View MSA
124061214 5270 Rosid View MSA
123738643 5271 Pentapetalae View MSA
122787724 5272 Eudicot View MSA
122045767 5273 Angiosperm View MSA
121347090 5274 Embryophyte View MSA
123424729 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain