Gene : Araha.1261s0005 A. halleri v1.1

Defline:  (1 of 8) PF04783 - Protein of unknown function (DUF630) (DUF630) Genomic Order:  5
Name:  ? Araha.1261s0005 Secondary Identifier:  ? PAC:28837594

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1261s0005 0.5kb upstream 0.5kb upstream 3887 true Scaffold1261: 39448-43334 Arabidopsis halleri
Araha.1261s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1261: 42835-43334 Arabidopsis halleri
Araha.1261s0005 0.5kb downstream 0.5kb downstream 3887 true Scaffold1261: 38948-42834 Arabidopsis halleri
Araha.1261s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1261: 38948-39447 Arabidopsis halleri
Araha.1261s0005 1.0kb upstream 1.0kb upstream 4387 true Scaffold1261: 39448-43834 Arabidopsis halleri
Araha.1261s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1261: 42835-43834 Arabidopsis halleri
Araha.1261s0005 1.0kb downstream 1.0kb downstream 4387 true Scaffold1261: 38448-42834 Arabidopsis halleri
Araha.1261s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1261: 38448-39447 Arabidopsis halleri
Araha.1261s0005 2.0kb upstream 2.0kb upstream 5387 true Scaffold1261: 39448-44834 Arabidopsis halleri
Araha.1261s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1261: 42835-44834 Arabidopsis halleri
Araha.1261s0005 2.0kb downstream 2.0kb downstream 5387 true Scaffold1261: 37448-42834 Arabidopsis halleri
Araha.1261s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1261: 37448-39447 Arabidopsis halleri
Araha.1261s0005 5.0kb upstream 5.0kb upstream 8387 true Scaffold1261: 39448-47834 Arabidopsis halleri
Araha.1261s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1261: 42835-47834 Arabidopsis halleri
Araha.1261s0005 5.0kb downstream 5.0kb downstream 8387 true Scaffold1261: 34448-42834 Arabidopsis halleri
Araha.1261s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1261: 34448-39447 Arabidopsis halleri
Araha.1261s0005 10.0kb upstream 10.0kb upstream 13387 true Scaffold1261: 39448-52834 Arabidopsis halleri
Araha.1261s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1261: 42835-52834 Arabidopsis halleri
Araha.1261s0005 10.0kb downstream 10.0kb downstream 13387 true Scaffold1261: 29448-42834 Arabidopsis halleri
Araha.1261s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1261: 29448-39447 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364269 5261 Brassicaceae View MSA
123798720 5264 Brassicales-Malvales View MSA
124296321 5266 SBM View MSA
124148504 5268 Malvidae View MSA
124065159 5270 Rosid View MSA
123737730 5271 Pentapetalae View MSA
122792779 5272 Eudicot View MSA
122046534 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain