Gene : Araha.0028s0016 A. halleri v1.1

Defline:  (1 of 1) PTHR13780:SF36 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 Genomic Order:  16
Name:  ? Araha.0028s0016 Secondary Identifier:  ? PAC:28854318

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0028s0016 0.5kb upstream 0.5kb upstream 2779 true Scaffold28: 70041-72819 Arabidopsis halleri
Araha.0028s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold28: 72320-72819 Arabidopsis halleri
Araha.0028s0016 0.5kb downstream 0.5kb downstream 2779 true Scaffold28: 69541-72319 Arabidopsis halleri
Araha.0028s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold28: 69541-70040 Arabidopsis halleri
Araha.0028s0016 1.0kb upstream 1.0kb upstream 3279 true Scaffold28: 70041-73319 Arabidopsis halleri
Araha.0028s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold28: 72320-73319 Arabidopsis halleri
Araha.0028s0016 1.0kb downstream 1.0kb downstream 3279 true Scaffold28: 69041-72319 Arabidopsis halleri
Araha.0028s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold28: 69041-70040 Arabidopsis halleri
Araha.0028s0016 2.0kb upstream 2.0kb upstream 4279 true Scaffold28: 70041-74319 Arabidopsis halleri
Araha.0028s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold28: 72320-74319 Arabidopsis halleri
Araha.0028s0016 2.0kb downstream 2.0kb downstream 4279 true Scaffold28: 68041-72319 Arabidopsis halleri
Araha.0028s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold28: 68041-70040 Arabidopsis halleri
Araha.0028s0016 5.0kb upstream 5.0kb upstream 7279 true Scaffold28: 70041-77319 Arabidopsis halleri
Araha.0028s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold28: 72320-77319 Arabidopsis halleri
Araha.0028s0016 5.0kb downstream 5.0kb downstream 7279 true Scaffold28: 65041-72319 Arabidopsis halleri
Araha.0028s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold28: 65041-70040 Arabidopsis halleri
Araha.0028s0016 10.0kb upstream 10.0kb upstream 10190 true Scaffold28: 70041-80230 Arabidopsis halleri
Araha.0028s0016 10.0kb upstream 10.0kb upstream 7911 false Scaffold28: 72320-80230 Arabidopsis halleri
Araha.0028s0016 10.0kb downstream 10.0kb downstream 12279 true Scaffold28: 60041-72319 Arabidopsis halleri
Araha.0028s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold28: 60041-70040 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369351 5261 Brassicaceae View MSA
123841404 5264 Brassicales-Malvales View MSA
124344720 5266 SBM View MSA
124239322 5268 Malvidae View MSA
124068322 5270 Rosid View MSA
123743835 5271 Pentapetalae View MSA
122791351 5272 Eudicot View MSA
122045346 5273 Angiosperm View MSA
121348243 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain