Gene : Araha.0253s0008 A. halleri v1.1

Defline:  (1 of 6) PF07647 - SAM domain (Sterile alpha motif) (SAM_2) Genomic Order:  8
Name:  ? Araha.0253s0008 Secondary Identifier:  ? PAC:28853901

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0253s0008 0.5kb upstream 0.5kb upstream 1195 true Scaffold253: 27003-28197 Arabidopsis halleri
Araha.0253s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold253: 27698-28197 Arabidopsis halleri
Araha.0253s0008 0.5kb downstream 0.5kb downstream 1195 true Scaffold253: 26503-27697 Arabidopsis halleri
Araha.0253s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold253: 26503-27002 Arabidopsis halleri
Araha.0253s0008 1.0kb upstream 1.0kb upstream 1695 true Scaffold253: 27003-28697 Arabidopsis halleri
Araha.0253s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold253: 27698-28697 Arabidopsis halleri
Araha.0253s0008 1.0kb downstream 1.0kb downstream 1695 true Scaffold253: 26003-27697 Arabidopsis halleri
Araha.0253s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold253: 26003-27002 Arabidopsis halleri
Araha.0253s0008 2.0kb upstream 2.0kb upstream 2695 true Scaffold253: 27003-29697 Arabidopsis halleri
Araha.0253s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold253: 27698-29697 Arabidopsis halleri
Araha.0253s0008 2.0kb downstream 2.0kb downstream 2695 true Scaffold253: 25003-27697 Arabidopsis halleri
Araha.0253s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold253: 25003-27002 Arabidopsis halleri
Araha.0253s0008 5.0kb upstream 5.0kb upstream 5695 true Scaffold253: 27003-32697 Arabidopsis halleri
Araha.0253s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold253: 27698-32697 Arabidopsis halleri
Araha.0253s0008 5.0kb downstream 5.0kb downstream 5695 true Scaffold253: 22003-27697 Arabidopsis halleri
Araha.0253s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold253: 22003-27002 Arabidopsis halleri
Araha.0253s0008 10.0kb upstream 10.0kb upstream 10695 true Scaffold253: 27003-37697 Arabidopsis halleri
Araha.0253s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold253: 27698-37697 Arabidopsis halleri
Araha.0253s0008 10.0kb downstream 10.0kb downstream 10695 true Scaffold253: 17003-27697 Arabidopsis halleri
Araha.0253s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold253: 17003-27002 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373161 5261 Brassicaceae View MSA
123839675 5264 Brassicales-Malvales View MSA
124344189 5266 SBM View MSA
124242329 5268 Malvidae View MSA
124063066 5270 Rosid View MSA
123745428 5271 Pentapetalae View MSA
122789154 5272 Eudicot View MSA
122048035 5273 Angiosperm View MSA
121310835 5274 Embryophyte View MSA
123348222 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain