Gene : Araha.0173s0006 A. halleri v1.1
Defline:  (1 of 6) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  6
Name:  ? Araha.0173s0006 Secondary Identifier:  ? PAC:28846962
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri BRANCHED-CHAIN-AA-SYN-PWY Arabidopsis halleri pathologic  
Ahalleri LEUSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0173s0006 0.5kb upstream 0.5kb upstream 1966 true Scaffold173: 30972-32937 Arabidopsis halleri
Araha.0173s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold173: 32438-32937 Arabidopsis halleri
Araha.0173s0006 0.5kb downstream 0.5kb downstream 1966 true Scaffold173: 30472-32437 Arabidopsis halleri
Araha.0173s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold173: 30472-30971 Arabidopsis halleri
Araha.0173s0006 1.0kb upstream 1.0kb upstream 2466 true Scaffold173: 30972-33437 Arabidopsis halleri
Araha.0173s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold173: 32438-33437 Arabidopsis halleri
Araha.0173s0006 1.0kb downstream 1.0kb downstream 2466 true Scaffold173: 29972-32437 Arabidopsis halleri
Araha.0173s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold173: 29972-30971 Arabidopsis halleri
Araha.0173s0006 2.0kb upstream 2.0kb upstream 3466 true Scaffold173: 30972-34437 Arabidopsis halleri
Araha.0173s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold173: 32438-34437 Arabidopsis halleri
Araha.0173s0006 2.0kb downstream 2.0kb downstream 3466 true Scaffold173: 28972-32437 Arabidopsis halleri
Araha.0173s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold173: 28972-30971 Arabidopsis halleri
Araha.0173s0006 5.0kb upstream 5.0kb upstream 6466 true Scaffold173: 30972-37437 Arabidopsis halleri
Araha.0173s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold173: 32438-37437 Arabidopsis halleri
Araha.0173s0006 5.0kb downstream 5.0kb downstream 6466 true Scaffold173: 25972-32437 Arabidopsis halleri
Araha.0173s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold173: 25972-30971 Arabidopsis halleri
Araha.0173s0006 10.0kb upstream 10.0kb upstream 11466 true Scaffold173: 30972-42437 Arabidopsis halleri
Araha.0173s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold173: 32438-42437 Arabidopsis halleri
Araha.0173s0006 10.0kb downstream 10.0kb downstream 11466 true Scaffold173: 20972-32437 Arabidopsis halleri
Araha.0173s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold173: 20972-30971 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040980 5273 Angiosperm View MSA
122362047 5261 Brassicaceae View MSA
123839118 5264 Brassicales-Malvales View MSA
124338093 5266 SBM View MSA
124250878 5268 Malvidae View MSA
124068442 5270 Rosid View MSA
123736502 5271 Pentapetalae View MSA
122789957 5272 Eudicot View MSA
121345878 5274 Embryophyte View MSA
123423763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain