Gene : Araha.0437s0005 A. halleri v1.1
Defline:  (1 of 1) PTHR12050:SF1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG Genomic Order:  5
Name:  ? Araha.0437s0005 Secondary Identifier:  ? PAC:28849293
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0437s0005 0.5kb upstream 0.5kb upstream 2340 true Scaffold437: 28049-30388 Arabidopsis halleri
Araha.0437s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold437: 28049-28548 Arabidopsis halleri
Araha.0437s0005 0.5kb downstream 0.5kb downstream 2340 true Scaffold437: 28549-30888 Arabidopsis halleri
Araha.0437s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold437: 30389-30888 Arabidopsis halleri
Araha.0437s0005 1.0kb upstream 1.0kb upstream 2840 true Scaffold437: 27549-30388 Arabidopsis halleri
Araha.0437s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold437: 27549-28548 Arabidopsis halleri
Araha.0437s0005 1.0kb downstream 1.0kb downstream 2840 true Scaffold437: 28549-31388 Arabidopsis halleri
Araha.0437s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold437: 30389-31388 Arabidopsis halleri
Araha.0437s0005 2.0kb upstream 2.0kb upstream 3840 true Scaffold437: 26549-30388 Arabidopsis halleri
Araha.0437s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold437: 26549-28548 Arabidopsis halleri
Araha.0437s0005 2.0kb downstream 2.0kb downstream 3840 true Scaffold437: 28549-32388 Arabidopsis halleri
Araha.0437s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold437: 30389-32388 Arabidopsis halleri
Araha.0437s0005 5.0kb upstream 5.0kb upstream 6840 true Scaffold437: 23549-30388 Arabidopsis halleri
Araha.0437s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold437: 23549-28548 Arabidopsis halleri
Araha.0437s0005 5.0kb downstream 5.0kb downstream 6840 true Scaffold437: 28549-35388 Arabidopsis halleri
Araha.0437s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold437: 30389-35388 Arabidopsis halleri
Araha.0437s0005 10.0kb upstream 10.0kb upstream 11840 true Scaffold437: 18549-30388 Arabidopsis halleri
Araha.0437s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold437: 18549-28548 Arabidopsis halleri
Araha.0437s0005 10.0kb downstream 10.0kb downstream 11840 true Scaffold437: 28549-40388 Arabidopsis halleri
Araha.0437s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold437: 30389-40388 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365856 5261 Brassicaceae View MSA
123827874 5264 Brassicales-Malvales View MSA
124339272 5266 SBM View MSA
124241537 5268 Malvidae View MSA
124063818 5270 Rosid View MSA
123749755 5271 Pentapetalae View MSA
122786869 5272 Eudicot View MSA
122046998 5273 Angiosperm View MSA
121348404 5274 Embryophyte View MSA
123428267 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain