Gene : Araha.0398s0002 A. halleri v1.1
Defline:  (1 of 1) 2.5.1.16//2.5.1.22 - Spermidine synthase / Putrescine aminopropyltransferase // Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  2
Name:  ? Araha.0398s0002 Secondary Identifier:  ? PAC:28839256
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ARGSPECAT-PWY Arabidopsis halleri pathologic  
Ahalleri BSUBPOLYAMSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-7528 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0398s0002 0.5kb upstream 0.5kb upstream 3787 true Scaffold398: 6662-10448 Arabidopsis halleri
Araha.0398s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold398: 6662-7161 Arabidopsis halleri
Araha.0398s0002 0.5kb downstream 0.5kb downstream 3787 true Scaffold398: 7162-10948 Arabidopsis halleri
Araha.0398s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold398: 10449-10948 Arabidopsis halleri
Araha.0398s0002 1.0kb upstream 1.0kb upstream 4287 true Scaffold398: 6162-10448 Arabidopsis halleri
Araha.0398s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold398: 6162-7161 Arabidopsis halleri
Araha.0398s0002 1.0kb downstream 1.0kb downstream 4287 true Scaffold398: 7162-11448 Arabidopsis halleri
Araha.0398s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold398: 10449-11448 Arabidopsis halleri
Araha.0398s0002 2.0kb upstream 2.0kb upstream 5287 true Scaffold398: 5162-10448 Arabidopsis halleri
Araha.0398s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold398: 5162-7161 Arabidopsis halleri
Araha.0398s0002 2.0kb downstream 2.0kb downstream 5287 true Scaffold398: 7162-12448 Arabidopsis halleri
Araha.0398s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold398: 10449-12448 Arabidopsis halleri
Araha.0398s0002 5.0kb upstream 5.0kb upstream 8287 true Scaffold398: 2162-10448 Arabidopsis halleri
Araha.0398s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold398: 2162-7161 Arabidopsis halleri
Araha.0398s0002 5.0kb downstream 5.0kb downstream 8287 true Scaffold398: 7162-15448 Arabidopsis halleri
Araha.0398s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold398: 10449-15448 Arabidopsis halleri
Araha.0398s0002 10.0kb upstream 10.0kb upstream 10448 true Scaffold398: 1-10448 Arabidopsis halleri
Araha.0398s0002 10.0kb upstream 10.0kb upstream 7161 false Scaffold398: 1-7161 Arabidopsis halleri
Araha.0398s0002 10.0kb downstream 10.0kb downstream 13287 true Scaffold398: 7162-20448 Arabidopsis halleri
Araha.0398s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold398: 10449-20448 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374357 5261 Brassicaceae View MSA
123829244 5264 Brassicales-Malvales View MSA
124341220 5266 SBM View MSA
124251479 5268 Malvidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain