Gene : Araha.0351s0006 A. halleri v1.1
Defline:  (1 of 2) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  6
Name:  ? Araha.0351s0006 Secondary Identifier:  ? PAC:28849537
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5173 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PYRUVDEHYD-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0351s0006 0.5kb upstream 0.5kb upstream 2902 true Scaffold351: 12271-15172 Arabidopsis halleri
Araha.0351s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold351: 14673-15172 Arabidopsis halleri
Araha.0351s0006 0.5kb downstream 0.5kb downstream 2902 true Scaffold351: 11771-14672 Arabidopsis halleri
Araha.0351s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold351: 11771-12270 Arabidopsis halleri
Araha.0351s0006 1.0kb upstream 1.0kb upstream 3402 true Scaffold351: 12271-15672 Arabidopsis halleri
Araha.0351s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold351: 14673-15672 Arabidopsis halleri
Araha.0351s0006 1.0kb downstream 1.0kb downstream 3402 true Scaffold351: 11271-14672 Arabidopsis halleri
Araha.0351s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold351: 11271-12270 Arabidopsis halleri
Araha.0351s0006 2.0kb upstream 2.0kb upstream 4402 true Scaffold351: 12271-16672 Arabidopsis halleri
Araha.0351s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold351: 14673-16672 Arabidopsis halleri
Araha.0351s0006 2.0kb downstream 2.0kb downstream 4402 true Scaffold351: 10271-14672 Arabidopsis halleri
Araha.0351s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold351: 10271-12270 Arabidopsis halleri
Araha.0351s0006 5.0kb upstream 5.0kb upstream 7402 true Scaffold351: 12271-19672 Arabidopsis halleri
Araha.0351s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold351: 14673-19672 Arabidopsis halleri
Araha.0351s0006 5.0kb downstream 5.0kb downstream 7402 true Scaffold351: 7271-14672 Arabidopsis halleri
Araha.0351s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold351: 7271-12270 Arabidopsis halleri
Araha.0351s0006 10.0kb upstream 10.0kb upstream 12402 true Scaffold351: 12271-24672 Arabidopsis halleri
Araha.0351s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold351: 14673-24672 Arabidopsis halleri
Araha.0351s0006 10.0kb downstream 10.0kb downstream 12402 true Scaffold351: 2271-14672 Arabidopsis halleri
Araha.0351s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold351: 2271-12270 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375501 5261 Brassicaceae View MSA
123840734 5264 Brassicales-Malvales View MSA
124338432 5266 SBM View MSA
124241225 5268 Malvidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain