Gene : Araha.0617s0002 A. halleri v1.1
Defline:  (1 of 1) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  2
Name:  ? Araha.0617s0002 Secondary Identifier:  ? PAC:28859570
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0617s0002 0.5kb upstream 0.5kb upstream 7145 true Scaffold617: 2447-9591 Arabidopsis halleri
Araha.0617s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold617: 2447-2946 Arabidopsis halleri
Araha.0617s0002 0.5kb downstream 0.5kb downstream 7145 true Scaffold617: 2947-10091 Arabidopsis halleri
Araha.0617s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold617: 9592-10091 Arabidopsis halleri
Araha.0617s0002 1.0kb upstream 1.0kb upstream 7645 true Scaffold617: 1947-9591 Arabidopsis halleri
Araha.0617s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold617: 1947-2946 Arabidopsis halleri
Araha.0617s0002 1.0kb downstream 1.0kb downstream 7645 true Scaffold617: 2947-10591 Arabidopsis halleri
Araha.0617s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold617: 9592-10591 Arabidopsis halleri
Araha.0617s0002 2.0kb upstream 2.0kb upstream 8645 true Scaffold617: 947-9591 Arabidopsis halleri
Araha.0617s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold617: 947-2946 Arabidopsis halleri
Araha.0617s0002 2.0kb downstream 2.0kb downstream 8645 true Scaffold617: 2947-11591 Arabidopsis halleri
Araha.0617s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold617: 9592-11591 Arabidopsis halleri
Araha.0617s0002 5.0kb upstream 5.0kb upstream 9591 true Scaffold617: 1-9591 Arabidopsis halleri
Araha.0617s0002 5.0kb upstream 5.0kb upstream 2946 false Scaffold617: 1-2946 Arabidopsis halleri
Araha.0617s0002 5.0kb downstream 5.0kb downstream 11645 true Scaffold617: 2947-14591 Arabidopsis halleri
Araha.0617s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold617: 9592-14591 Arabidopsis halleri
Araha.0617s0002 10.0kb upstream 10.0kb upstream 9591 true Scaffold617: 1-9591 Arabidopsis halleri
Araha.0617s0002 10.0kb upstream 10.0kb upstream 2946 false Scaffold617: 1-2946 Arabidopsis halleri
Araha.0617s0002 10.0kb downstream 10.0kb downstream 16645 true Scaffold617: 2947-19591 Arabidopsis halleri
Araha.0617s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold617: 9592-19591 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364572 5261 Brassicaceae View MSA
123831708 5264 Brassicales-Malvales View MSA
124345417 5266 SBM View MSA
124244144 5268 Malvidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain