Protein Family : homeobox-1 122786620

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  86
Paste the following link

86 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29983.t000027 (1 of 2) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) R. communis v0.1 12397   29983: 145255-157651
30190.t000543 (1 of 1) PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) R. communis v0.1 10250   30190: 94415-104664
Cucsa.046480 (1 of 1) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) C. sativus v1.0 10757   scaffold00542: 1932372-1943128
orange1.1g000279m.g (1 of 1) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) C. sinensis v1.1 10613   scaffold00007: 208273-218885
AT5G44180 (1 of 1) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) A. thaliana TAIR10 6840   Chr5: 17783172-17790011
AT1G28420 (1 of 1) KOG2251 - Homeobox transcription factor A. thaliana TAIR10 HB-1 7837   Chr1: 9979802-9987638
Thhalv10003131m.g (1 of 1) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) E. salsugineum v1.0 5884   scaffold_17: 204433-210316
Thhalv10006543m.g (1 of 1) PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) E. salsugineum v1.0 8252   scaffold_5: 5305317-5313568
Ciclev10014022m.g (1 of 1) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) C. clementina v1.0 12891   scaffold_2: 10459593-10472483
Ciclev10014023m.g (1 of 1) PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) C. clementina v1.0 10057   scaffold_2: 33725772-33735828
Lus10018634.g (1 of 2) PF00046//PF02791//PF05066//PF15612//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) L. usitatissimum v1.0 7654   scaffold1308: 641596-649249
Lus10039870.g (1 of 2) PF00046//PF02791//PF05066//PF15612//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) L. usitatissimum v1.0 7596   scaffold15: 1998520-2006115
Lus10025454.g (1 of 2) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) L. usitatissimum v1.0 7456   scaffold46: 770598-778053
Lus10015325.g (1 of 2) KOG1951 - GTP-binding protein AARP2 involved in 40S ribosome biogenesis L. usitatissimum v1.0 7497   scaffold924: 508492-515988
Gorai.008G155100 (1 of 3) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) G. raimondii v2.1 13218   Chr08: 41431013-41444230
Gorai.010G243500 (1 of 3) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) G. raimondii v2.1 9491   Chr10: 61211545-61221035
Gorai.010G256900 (1 of 1) KOG0485 - Transcription factor NKX-5.1/HMX1, contains HOX domain G. raimondii v2.1 9499   Chr10: 62156078-62165576
Thecc1EG008214 (1 of 2) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) T. cacao v1.1 15233   scaffold_2: 11916683-11931915
Thecc1EG029805 (1 of 1) KOG0485//KOG2251 - Transcription factor NKX-5.1/HMX1, contains HOX domain // Homeobox transcription factor T. cacao v1.1 12239   scaffold_6: 24407600-24419838
Migut.H01470 (1 of 2) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) M. guttatus v2.0 9100   scaffold_8: 16215897-16224996
Migut.M01107 (1 of 2) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) M. guttatus v2.0 9702   scaffold_13: 16942569-16952270
Araha.0617s0002 (1 of 1) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) A. halleri v1.1 6645   Scaffold617: 2947-9591
Araha.5599s0006 (1 of 1) KOG2251 - Homeobox transcription factor A. halleri v1.1 8025   Scaffold5599: 28952-36976
Cagra.0381s0009 (1 of 1) KOG3119 - Basic region leucine zipper transcription factor C. grandiflora v1.1 7477   Scaffold381: 54985-62461
Cagra.1822s0015 (1 of 1) PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) C. grandiflora v1.1 8442   Scaffold1822: 55203-63644
Glyma.06G288900 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) G. max Wm82.a2.v1 14731   Chr06: 47747596-47762326
Glyma.07G201200 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) G. max Wm82.a2.v1 10143   Chr07: 36970118-36980260
Glyma.13G175200 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) G. max Wm82.a2.v1 9801   Chr13: 28979340-28989140
Glyma.13G235300 (1 of 1) PTHR24326:SF290 - GB G. max Wm82.a2.v1 10712   Chr13: 34590673-34601384
Brara.F03761 (1 of 1) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) B. rapa FPsc v1.3 7262   A06: 28448453-28455714

86 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30190.m011307 R. communis v0.1 122786620 homeobox-1 2 5272 Eudicot
AT1G28420.1 A. thaliana TAIR10 122786620 homeobox-1 2 5272 Eudicot
AT5G44180.1 A. thaliana TAIR10 122786620 homeobox-1 2 5272 Eudicot
Lus10025454 L. usitatissimum v1.0 122786620 homeobox-1 4 5272 Eudicot
Lus10015325 L. usitatissimum v1.0 122786620 homeobox-1 4 5272 Eudicot
Thecc1EG008214t2 T. cacao v1.1 122786620 homeobox-1 2 5272 Eudicot
Araha.0617s0002.1.p A. halleri v1.1 122786620 homeobox-1 2 5272 Eudicot
Glyma.07G201200.1.p G. max Wm82.a2.v1 122786620 homeobox-1 4 5272 Eudicot
Glyma.06G288900.1.p G. max Wm82.a2.v1 122786620 homeobox-1 4 5272 Eudicot
Brara.I02942.1.p B. rapa FPsc v1.3 122786620 homeobox-1 3 5272 Eudicot
Bostr.15697s0165.1.p B. stricta v1.2 122786620 homeobox-1 2 5272 Eudicot
Medtr4g088375.1 M. truncatula Mt4.0v1 122786620 homeobox-1 3 5272 Eudicot
SapurV1A.0693s0030.1.p S. purpurea v1.0 122786620 homeobox-1 4 5272 Eudicot
Eucgr.D00596.1.p E. grandis v2.0 122786620 homeobox-1 2 5272 Eudicot
Eucgr.K01058.1.p E. grandis v2.0 122786620 homeobox-1 2 5272 Eudicot
Prupe.4G052600.1.p P. persica v2.1 122786620 homeobox-1 1 5272 Eudicot
Manes.17G049300.1.p M. esculenta v6.1 122786620 homeobox-1 2 5272 Eudicot
Kalax.0243s0027.1.p K. laxiflora v1.1 122786620 homeobox-1 1 5272 Eudicot
Aqcoe4G078600.1.p A. coerulea v3.1 122786620 homeobox-1 1 5272 Eudicot
AL8G15840.t1 A. lyrata v2.1 122786620 homeobox-1 2 5272 Eudicot
Tp57577_TGAC_v2_mRNA12031 T. pratense v2 122786620 homeobox-1 3 5272 Eudicot
DCAR_004044 D. carota v2.0 122786620 homeobox-1 3 5272 Eudicot
DCAR_021265 D. carota v2.0 122786620 homeobox-1 3 5272 Eudicot
Solyc02g077660.2.1 S. lycopersicum ITAG2.4 122786620 homeobox-1 2 5272 Eudicot
Solyc07g053610.2.1 S. lycopersicum ITAG2.4 122786620 homeobox-1 2 5272 Eudicot
AUR62036057-RA C. quinoa v1.0 122786620 homeobox-1 2 5272 Eudicot
Phvul.006G182000.1.p P. vulgaris v2.1 122786620 homeobox-1 2 5272 Eudicot
Phvul.002G232200.1.p P. vulgaris v2.1 122786620 homeobox-1 2 5272 Eudicot
Potri.017G016200.1.p P. trichocarpa v3.1 122786620 homeobox-1 3 5272 Eudicot
Potri.011G057700.1.p P. trichocarpa v3.1 122786620 homeobox-1 3 5272 Eudicot