Gene : Lus10025454.g L. usitatissimum v1.0

Defline:  (1 of 2) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  99
Name:  ? Lus10025454.g Secondary Identifier:  ? PAC:23150795

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10025454.g 0.5kb upstream 0.5kb upstream 7956 true scaffold46: 770598-778553 Linum usitatissimum
Lus10025454.g 0.5kb upstream 0.5kb upstream 500 false scaffold46: 778054-778553 Linum usitatissimum
Lus10025454.g 0.5kb downstream 0.5kb downstream 7956 true scaffold46: 770098-778053 Linum usitatissimum
Lus10025454.g 0.5kb downstream 0.5kb downstream 500 false scaffold46: 770098-770597 Linum usitatissimum
Lus10025454.g 1.0kb upstream 1.0kb upstream 8456 true scaffold46: 770598-779053 Linum usitatissimum
Lus10025454.g 1.0kb upstream 1.0kb upstream 1000 false scaffold46: 778054-779053 Linum usitatissimum
Lus10025454.g 1.0kb downstream 1.0kb downstream 8456 true scaffold46: 769598-778053 Linum usitatissimum
Lus10025454.g 1.0kb downstream 1.0kb downstream 1000 false scaffold46: 769598-770597 Linum usitatissimum
Lus10025454.g 2.0kb upstream 2.0kb upstream 9456 true scaffold46: 770598-780053 Linum usitatissimum
Lus10025454.g 2.0kb upstream 2.0kb upstream 2000 false scaffold46: 778054-780053 Linum usitatissimum
Lus10025454.g 2.0kb downstream 2.0kb downstream 9456 true scaffold46: 768598-778053 Linum usitatissimum
Lus10025454.g 2.0kb downstream 2.0kb downstream 2000 false scaffold46: 768598-770597 Linum usitatissimum
Lus10025454.g 5.0kb upstream 5.0kb upstream 12456 true scaffold46: 770598-783053 Linum usitatissimum
Lus10025454.g 5.0kb upstream 5.0kb upstream 5000 false scaffold46: 778054-783053 Linum usitatissimum
Lus10025454.g 5.0kb downstream 5.0kb downstream 12456 true scaffold46: 765598-778053 Linum usitatissimum
Lus10025454.g 5.0kb downstream 5.0kb downstream 5000 false scaffold46: 765598-770597 Linum usitatissimum
Lus10025454.g 10.0kb upstream 10.0kb upstream 17456 true scaffold46: 770598-788053 Linum usitatissimum
Lus10025454.g 10.0kb upstream 10.0kb upstream 10000 false scaffold46: 778054-788053 Linum usitatissimum
Lus10025454.g 10.0kb downstream 10.0kb downstream 17456 true scaffold46: 760598-778053 Linum usitatissimum
Lus10025454.g 10.0kb downstream 10.0kb downstream 10000 false scaffold46: 760598-770597 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454774 5262 Malpighiales View MSA
124237842 5268 Malvidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain