Gene : Cagra.0381s0009 C. grandiflora v1.1
Defline:  (1 of 1) KOG3119 - Basic region leucine zipper transcription factor Genomic Order:  9
Name:  ? Cagra.0381s0009 Secondary Identifier:  ? PAC:28893711
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0381s0009 0.5kb upstream 0.5kb upstream 7977 true Scaffold381: 54985-62961 Capsella grandiflora
Cagra.0381s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold381: 62462-62961 Capsella grandiflora
Cagra.0381s0009 0.5kb downstream 0.5kb downstream 7977 true Scaffold381: 54485-62461 Capsella grandiflora
Cagra.0381s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold381: 54485-54984 Capsella grandiflora
Cagra.0381s0009 1.0kb upstream 1.0kb upstream 8477 true Scaffold381: 54985-63461 Capsella grandiflora
Cagra.0381s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold381: 62462-63461 Capsella grandiflora
Cagra.0381s0009 1.0kb downstream 1.0kb downstream 8477 true Scaffold381: 53985-62461 Capsella grandiflora
Cagra.0381s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold381: 53985-54984 Capsella grandiflora
Cagra.0381s0009 2.0kb upstream 2.0kb upstream 9477 true Scaffold381: 54985-64461 Capsella grandiflora
Cagra.0381s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold381: 62462-64461 Capsella grandiflora
Cagra.0381s0009 2.0kb downstream 2.0kb downstream 9477 true Scaffold381: 52985-62461 Capsella grandiflora
Cagra.0381s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold381: 52985-54984 Capsella grandiflora
Cagra.0381s0009 5.0kb upstream 5.0kb upstream 12477 true Scaffold381: 54985-67461 Capsella grandiflora
Cagra.0381s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold381: 62462-67461 Capsella grandiflora
Cagra.0381s0009 5.0kb downstream 5.0kb downstream 12477 true Scaffold381: 49985-62461 Capsella grandiflora
Cagra.0381s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold381: 49985-54984 Capsella grandiflora
Cagra.0381s0009 10.0kb upstream 10.0kb upstream 17477 true Scaffold381: 54985-72461 Capsella grandiflora
Cagra.0381s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold381: 62462-72461 Capsella grandiflora
Cagra.0381s0009 10.0kb downstream 10.0kb downstream 17477 true Scaffold381: 44985-62461 Capsella grandiflora
Cagra.0381s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold381: 44985-54984 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364572 5261 Brassicaceae View MSA
123831708 5264 Brassicales-Malvales View MSA
124345417 5266 SBM View MSA
124244144 5268 Malvidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain