Gene : Glyma.06G288900 G. max Wm82.a2.v1
Defline:  (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Genomic Order:  2889
Name:  ? Glyma.06G288900 Secondary Identifier:  ? PAC:30551493
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G288900 0.5kb upstream 0.5kb upstream 15231 true Chr06: 47747096-47762326 Glycine max
Glyma.06G288900 0.5kb upstream 0.5kb upstream 500 false Chr06: 47747096-47747595 Glycine max
Glyma.06G288900 0.5kb downstream 0.5kb downstream 15231 true Chr06: 47747596-47762826 Glycine max
Glyma.06G288900 0.5kb downstream 0.5kb downstream 500 false Chr06: 47762327-47762826 Glycine max
Glyma.06G288900 1.0kb upstream 1.0kb upstream 15731 true Chr06: 47746596-47762326 Glycine max
Glyma.06G288900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47746596-47747595 Glycine max
Glyma.06G288900 1.0kb downstream 1.0kb downstream 15731 true Chr06: 47747596-47763326 Glycine max
Glyma.06G288900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47762327-47763326 Glycine max
Glyma.06G288900 2.0kb upstream 2.0kb upstream 16731 true Chr06: 47745596-47762326 Glycine max
Glyma.06G288900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47745596-47747595 Glycine max
Glyma.06G288900 2.0kb downstream 2.0kb downstream 16731 true Chr06: 47747596-47764326 Glycine max
Glyma.06G288900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47762327-47764326 Glycine max
Glyma.06G288900 5.0kb upstream 5.0kb upstream 19731 true Chr06: 47742596-47762326 Glycine max
Glyma.06G288900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47742596-47747595 Glycine max
Glyma.06G288900 5.0kb downstream 5.0kb downstream 19731 true Chr06: 47747596-47767326 Glycine max
Glyma.06G288900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47762327-47767326 Glycine max
Glyma.06G288900 10.0kb upstream 10.0kb upstream 24731 true Chr06: 47737596-47762326 Glycine max
Glyma.06G288900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47737596-47747595 Glycine max
Glyma.06G288900 10.0kb downstream 10.0kb downstream 24731 true Chr06: 47747596-47772326 Glycine max
Glyma.06G288900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47762327-47772326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314682 5265 Fabidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.80164 0.0 11.7076    
cufflinks 5.89929 0.0 22.9473   High
cufflinks 5.59151 0.0 19.5838    
cufflinks 5.31887 0.0 21.4345    
cufflinks 3.10442 0.0 9.76107    
cufflinks 2.20298 0.0 7.15943   Low
cufflinks 5.71666 0.0 17.9811    
cufflinks 4.34037 0.0 17.0363    
cufflinks 3.52365 0.0 14.003    
cufflinks 0.669        
cufflinks 0.375       Low
cufflinks 1.089       High
cufflinks 0.5        
cufflinks 0.429        
cufflinks 0.419        
cufflinks 0.834        
cufflinks 0.394       Low
cufflinks 1.412       High
cufflinks 1.213       High
cufflinks 0.885        
cufflinks 0.326       Low
cufflinks 0.925        
cufflinks 0.861        
cufflinks 0.435        
cufflinks 0.82        
cufflinks 0.403        

0 Strain