Gene : Thecc1EG008214 T. cacao v1.1
Defline:  (1 of 2) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Genomic Order:  1811
Name:  ? Thecc1EG008214 Secondary Identifier:  ? PAC:27460037
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008214 0.5kb upstream 0.5kb upstream 15733 true scaffold_2: 11916683-11932415 Theobroma cacao
Thecc1EG008214 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11931916-11932415 Theobroma cacao
Thecc1EG008214 0.5kb downstream 0.5kb downstream 15733 true scaffold_2: 11916183-11931915 Theobroma cacao
Thecc1EG008214 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11916183-11916682 Theobroma cacao
Thecc1EG008214 1.0kb upstream 1.0kb upstream 16233 true scaffold_2: 11916683-11932915 Theobroma cacao
Thecc1EG008214 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11931916-11932915 Theobroma cacao
Thecc1EG008214 1.0kb downstream 1.0kb downstream 16233 true scaffold_2: 11915683-11931915 Theobroma cacao
Thecc1EG008214 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11915683-11916682 Theobroma cacao
Thecc1EG008214 2.0kb upstream 2.0kb upstream 17233 true scaffold_2: 11916683-11933915 Theobroma cacao
Thecc1EG008214 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11931916-11933915 Theobroma cacao
Thecc1EG008214 2.0kb downstream 2.0kb downstream 17233 true scaffold_2: 11914683-11931915 Theobroma cacao
Thecc1EG008214 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11914683-11916682 Theobroma cacao
Thecc1EG008214 5.0kb upstream 5.0kb upstream 20233 true scaffold_2: 11916683-11936915 Theobroma cacao
Thecc1EG008214 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11931916-11936915 Theobroma cacao
Thecc1EG008214 5.0kb downstream 5.0kb downstream 20233 true scaffold_2: 11911683-11931915 Theobroma cacao
Thecc1EG008214 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11911683-11916682 Theobroma cacao
Thecc1EG008214 10.0kb upstream 10.0kb upstream 25233 true scaffold_2: 11916683-11941915 Theobroma cacao
Thecc1EG008214 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11931916-11941915 Theobroma cacao
Thecc1EG008214 10.0kb downstream 10.0kb downstream 25233 true scaffold_2: 11906683-11931915 Theobroma cacao
Thecc1EG008214 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11906683-11916682 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831708 5264 Brassicales-Malvales View MSA
124345417 5266 SBM View MSA
124244144 5268 Malvidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain