Gene : Glyma.13G235300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR24326:SF290 - GB Genomic Order:  2353
Name:  ? Glyma.13G235300 Secondary Identifier:  ? PAC:30503171
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G235300 0.5kb upstream 0.5kb upstream 11212 true Chr13: 34590173-34601384 Glycine max
Glyma.13G235300 0.5kb upstream 0.5kb upstream 500 false Chr13: 34590173-34590672 Glycine max
Glyma.13G235300 0.5kb downstream 0.5kb downstream 11212 true Chr13: 34590673-34601884 Glycine max
Glyma.13G235300 0.5kb downstream 0.5kb downstream 500 false Chr13: 34601385-34601884 Glycine max
Glyma.13G235300 1.0kb upstream 1.0kb upstream 11712 true Chr13: 34589673-34601384 Glycine max
Glyma.13G235300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34589673-34590672 Glycine max
Glyma.13G235300 1.0kb downstream 1.0kb downstream 11712 true Chr13: 34590673-34602384 Glycine max
Glyma.13G235300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34601385-34602384 Glycine max
Glyma.13G235300 2.0kb upstream 2.0kb upstream 12712 true Chr13: 34588673-34601384 Glycine max
Glyma.13G235300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34588673-34590672 Glycine max
Glyma.13G235300 2.0kb downstream 2.0kb downstream 12712 true Chr13: 34590673-34603384 Glycine max
Glyma.13G235300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34601385-34603384 Glycine max
Glyma.13G235300 5.0kb upstream 5.0kb upstream 15712 true Chr13: 34585673-34601384 Glycine max
Glyma.13G235300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34585673-34590672 Glycine max
Glyma.13G235300 5.0kb downstream 5.0kb downstream 15712 true Chr13: 34590673-34606384 Glycine max
Glyma.13G235300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34601385-34606384 Glycine max
Glyma.13G235300 10.0kb upstream 10.0kb upstream 20712 true Chr13: 34580673-34601384 Glycine max
Glyma.13G235300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34580673-34590672 Glycine max
Glyma.13G235300 10.0kb downstream 10.0kb downstream 20712 true Chr13: 34590673-34611384 Glycine max
Glyma.13G235300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34601385-34611384 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299741 5265 Fabidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0772 0.0 68.923   High
cufflinks 12.3789 0.0 48.6608    
cufflinks 17.8098 0.0 79.2435   High
cufflinks 11.9464 0.0 47.3762    
cufflinks 8.68406 0.0 32.2202    
cufflinks 6.66542 0.0 24.1074   Low
cufflinks 11.3449 0.0 44.7813    
cufflinks 9.75165 0.0 37.2609    
cufflinks 9.30645 0.0 34.7809    
cufflinks 3.341        
cufflinks 4.985        
cufflinks 5.749        
cufflinks 2.59       Low
cufflinks 2.668       Low
cufflinks 4.561        
cufflinks 4.972        
cufflinks 2.858       Low
cufflinks 6.093       High
cufflinks 5.082        
cufflinks 5.801        
cufflinks 3.668        
cufflinks 6.152       High
cufflinks 5.203        
cufflinks 4.437        
cufflinks 5.389        
cufflinks 3.833        

0 Strain