Gene : Glyma.07G201200 G. max Wm82.a2.v1
Defline:  (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Genomic Order:  2012
Name:  ? Glyma.07G201200 Secondary Identifier:  ? PAC:30492813
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G201200 0.5kb upstream 0.5kb upstream 10643 true Chr07: 36970118-36980760 Glycine max
Glyma.07G201200 0.5kb upstream 0.5kb upstream 500 false Chr07: 36980261-36980760 Glycine max
Glyma.07G201200 0.5kb downstream 0.5kb downstream 10643 true Chr07: 36969618-36980260 Glycine max
Glyma.07G201200 0.5kb downstream 0.5kb downstream 500 false Chr07: 36969618-36970117 Glycine max
Glyma.07G201200 1.0kb upstream 1.0kb upstream 11143 true Chr07: 36970118-36981260 Glycine max
Glyma.07G201200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36980261-36981260 Glycine max
Glyma.07G201200 1.0kb downstream 1.0kb downstream 11143 true Chr07: 36969118-36980260 Glycine max
Glyma.07G201200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36969118-36970117 Glycine max
Glyma.07G201200 2.0kb upstream 2.0kb upstream 12143 true Chr07: 36970118-36982260 Glycine max
Glyma.07G201200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36980261-36982260 Glycine max
Glyma.07G201200 2.0kb downstream 2.0kb downstream 12143 true Chr07: 36968118-36980260 Glycine max
Glyma.07G201200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36968118-36970117 Glycine max
Glyma.07G201200 5.0kb upstream 5.0kb upstream 15143 true Chr07: 36970118-36985260 Glycine max
Glyma.07G201200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36980261-36985260 Glycine max
Glyma.07G201200 5.0kb downstream 5.0kb downstream 15143 true Chr07: 36965118-36980260 Glycine max
Glyma.07G201200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36965118-36970117 Glycine max
Glyma.07G201200 10.0kb upstream 10.0kb upstream 20143 true Chr07: 36970118-36990260 Glycine max
Glyma.07G201200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36980261-36990260 Glycine max
Glyma.07G201200 10.0kb downstream 10.0kb downstream 20143 true Chr07: 36960118-36980260 Glycine max
Glyma.07G201200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36960118-36970117 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297221 5265 Fabidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.11608 0.0 25.8713   High
cufflinks 6.7859 0.0 20.763    
cufflinks 8.69545 0.0 27.685   High
cufflinks 5.62079 0.0 17.3819    
cufflinks 4.07039 0.0 12.3792   Low
cufflinks 4.71422 0.0 14.248    
cufflinks 4.8542 0.0 14.6914    
cufflinks 5.00099 0.0 14.8531    
cufflinks 5.66804 0.0 16.7992    
cufflinks 2.37        
cufflinks 1.943        
cufflinks 4.422       High
cufflinks 2.121        
cufflinks 1.999        
cufflinks 1.691       Low
cufflinks 3.515        
cufflinks 1.609       Low
cufflinks 5.878       High
cufflinks 3.729        
cufflinks 3.807        
cufflinks 1.744       Low
cufflinks 4.246       High
cufflinks 3.281        
cufflinks 2.521        
cufflinks 3.573        
cufflinks 2.497        

0 Strain