Gene : Araha.0509s0003 A. halleri v1.1
Defline:  (1 of 2) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  3
Name:  ? Araha.0509s0003 Secondary Identifier:  ? PAC:28837623
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CYSTSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6936 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0509s0003 0.5kb upstream 0.5kb upstream 2969 true Scaffold509: 7239-10207 Arabidopsis halleri
Araha.0509s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold509: 9708-10207 Arabidopsis halleri
Araha.0509s0003 0.5kb downstream 0.5kb downstream 2969 true Scaffold509: 6739-9707 Arabidopsis halleri
Araha.0509s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold509: 6739-7238 Arabidopsis halleri
Araha.0509s0003 1.0kb upstream 1.0kb upstream 3469 true Scaffold509: 7239-10707 Arabidopsis halleri
Araha.0509s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold509: 9708-10707 Arabidopsis halleri
Araha.0509s0003 1.0kb downstream 1.0kb downstream 3469 true Scaffold509: 6239-9707 Arabidopsis halleri
Araha.0509s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold509: 6239-7238 Arabidopsis halleri
Araha.0509s0003 2.0kb upstream 2.0kb upstream 4469 true Scaffold509: 7239-11707 Arabidopsis halleri
Araha.0509s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold509: 9708-11707 Arabidopsis halleri
Araha.0509s0003 2.0kb downstream 2.0kb downstream 4469 true Scaffold509: 5239-9707 Arabidopsis halleri
Araha.0509s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold509: 5239-7238 Arabidopsis halleri
Araha.0509s0003 5.0kb upstream 5.0kb upstream 7469 true Scaffold509: 7239-14707 Arabidopsis halleri
Araha.0509s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold509: 9708-14707 Arabidopsis halleri
Araha.0509s0003 5.0kb downstream 5.0kb downstream 7469 true Scaffold509: 2239-9707 Arabidopsis halleri
Araha.0509s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold509: 2239-7238 Arabidopsis halleri
Araha.0509s0003 10.0kb upstream 10.0kb upstream 12469 true Scaffold509: 7239-19707 Arabidopsis halleri
Araha.0509s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold509: 9708-19707 Arabidopsis halleri
Araha.0509s0003 10.0kb downstream 10.0kb downstream 9707 true Scaffold509: 1-9707 Arabidopsis halleri
Araha.0509s0003 10.0kb downstream 10.0kb downstream 7238 false Scaffold509: 1-7238 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363460 5261 Brassicaceae View MSA
123838527 5264 Brassicales-Malvales View MSA
124322470 5266 SBM View MSA
124240190 5268 Malvidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain