Gene : Araha.0776s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  1
Name:  ? Araha.0776s0001 Secondary Identifier:  ? PAC:28863478

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0776s0001 0.5kb upstream 0.5kb upstream 2103 true Scaffold776: 2692-4794 Arabidopsis halleri
Araha.0776s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold776: 2692-3191 Arabidopsis halleri
Araha.0776s0001 0.5kb downstream 0.5kb downstream 2103 true Scaffold776: 3192-5294 Arabidopsis halleri
Araha.0776s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold776: 4795-5294 Arabidopsis halleri
Araha.0776s0001 1.0kb upstream 1.0kb upstream 2603 true Scaffold776: 2192-4794 Arabidopsis halleri
Araha.0776s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold776: 2192-3191 Arabidopsis halleri
Araha.0776s0001 1.0kb downstream 1.0kb downstream 2603 true Scaffold776: 3192-5794 Arabidopsis halleri
Araha.0776s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold776: 4795-5794 Arabidopsis halleri
Araha.0776s0001 2.0kb upstream 2.0kb upstream 3603 true Scaffold776: 1192-4794 Arabidopsis halleri
Araha.0776s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold776: 1192-3191 Arabidopsis halleri
Araha.0776s0001 2.0kb downstream 2.0kb downstream 3603 true Scaffold776: 3192-6794 Arabidopsis halleri
Araha.0776s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold776: 4795-6794 Arabidopsis halleri
Araha.0776s0001 5.0kb upstream 5.0kb upstream 4794 true Scaffold776: 1-4794 Arabidopsis halleri
Araha.0776s0001 5.0kb upstream 5.0kb upstream 3191 false Scaffold776: 1-3191 Arabidopsis halleri
Araha.0776s0001 5.0kb downstream 5.0kb downstream 6603 true Scaffold776: 3192-9794 Arabidopsis halleri
Araha.0776s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold776: 4795-9794 Arabidopsis halleri
Araha.0776s0001 10.0kb upstream 10.0kb upstream 4794 true Scaffold776: 1-4794 Arabidopsis halleri
Araha.0776s0001 10.0kb upstream 10.0kb upstream 3191 false Scaffold776: 1-3191 Arabidopsis halleri
Araha.0776s0001 10.0kb downstream 10.0kb downstream 11603 true Scaffold776: 3192-14794 Arabidopsis halleri
Araha.0776s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold776: 4795-14794 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376535 5261 Brassicaceae View MSA
123841157 5264 Brassicales-Malvales View MSA
124344283 5266 SBM View MSA
124249653 5268 Malvidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain