Gene : Araha.1240s0006 A. halleri v1.1

Defline:  (1 of 3) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE Genomic Order:  6
Name:  ? Araha.1240s0006 Secondary Identifier:  ? PAC:28851812

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1240s0006 0.5kb upstream 0.5kb upstream 1729 true Scaffold1240: 19300-21028 Arabidopsis halleri
Araha.1240s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1240: 19300-19799 Arabidopsis halleri
Araha.1240s0006 0.5kb downstream 0.5kb downstream 1729 true Scaffold1240: 19800-21528 Arabidopsis halleri
Araha.1240s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1240: 21029-21528 Arabidopsis halleri
Araha.1240s0006 1.0kb upstream 1.0kb upstream 2229 true Scaffold1240: 18800-21028 Arabidopsis halleri
Araha.1240s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1240: 18800-19799 Arabidopsis halleri
Araha.1240s0006 1.0kb downstream 1.0kb downstream 2229 true Scaffold1240: 19800-22028 Arabidopsis halleri
Araha.1240s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1240: 21029-22028 Arabidopsis halleri
Araha.1240s0006 2.0kb upstream 2.0kb upstream 3229 true Scaffold1240: 17800-21028 Arabidopsis halleri
Araha.1240s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1240: 17800-19799 Arabidopsis halleri
Araha.1240s0006 2.0kb downstream 2.0kb downstream 3229 true Scaffold1240: 19800-23028 Arabidopsis halleri
Araha.1240s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1240: 21029-23028 Arabidopsis halleri
Araha.1240s0006 5.0kb upstream 5.0kb upstream 6229 true Scaffold1240: 14800-21028 Arabidopsis halleri
Araha.1240s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1240: 14800-19799 Arabidopsis halleri
Araha.1240s0006 5.0kb downstream 5.0kb downstream 6229 true Scaffold1240: 19800-26028 Arabidopsis halleri
Araha.1240s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1240: 21029-26028 Arabidopsis halleri
Araha.1240s0006 10.0kb upstream 10.0kb upstream 11229 true Scaffold1240: 9800-21028 Arabidopsis halleri
Araha.1240s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1240: 9800-19799 Arabidopsis halleri
Araha.1240s0006 10.0kb downstream 10.0kb downstream 8175 true Scaffold1240: 19800-27974 Arabidopsis halleri
Araha.1240s0006 10.0kb downstream 10.0kb downstream 6946 false Scaffold1240: 21029-27974 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363148 5261 Brassicaceae View MSA
123798486 5264 Brassicales-Malvales View MSA
124296113 5266 SBM View MSA
124148363 5268 Malvidae View MSA
123874369 5270 Rosid View MSA
123458355 5271 Pentapetalae View MSA
122493761 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain