Gene : Araha.1159s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR10742:SF229 - PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1
Name:  ? Araha.1159s0001 Secondary Identifier:  ? PAC:28850458
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CHLOROPHYLL-SYN Arabidopsis halleri pathologic  
Ahalleri HEME-BIOSYNTHESIS-II Arabidopsis halleri pathologic  
Ahalleri PWY-5918 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1159s0001 0.5kb upstream 0.5kb upstream 4910 true Scaffold1159: 974-5883 Arabidopsis halleri
Araha.1159s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1159: 5384-5883 Arabidopsis halleri
Araha.1159s0001 0.5kb downstream 0.5kb downstream 4910 true Scaffold1159: 474-5383 Arabidopsis halleri
Araha.1159s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1159: 474-973 Arabidopsis halleri
Araha.1159s0001 1.0kb upstream 1.0kb upstream 5410 true Scaffold1159: 974-6383 Arabidopsis halleri
Araha.1159s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1159: 5384-6383 Arabidopsis halleri
Araha.1159s0001 1.0kb downstream 1.0kb downstream 5383 true Scaffold1159: 1-5383 Arabidopsis halleri
Araha.1159s0001 1.0kb downstream 1.0kb downstream 973 false Scaffold1159: 1-973 Arabidopsis halleri
Araha.1159s0001 2.0kb upstream 2.0kb upstream 6410 true Scaffold1159: 974-7383 Arabidopsis halleri
Araha.1159s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1159: 5384-7383 Arabidopsis halleri
Araha.1159s0001 2.0kb downstream 2.0kb downstream 5383 true Scaffold1159: 1-5383 Arabidopsis halleri
Araha.1159s0001 2.0kb downstream 2.0kb downstream 973 false Scaffold1159: 1-973 Arabidopsis halleri
Araha.1159s0001 5.0kb upstream 5.0kb upstream 9410 true Scaffold1159: 974-10383 Arabidopsis halleri
Araha.1159s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1159: 5384-10383 Arabidopsis halleri
Araha.1159s0001 5.0kb downstream 5.0kb downstream 5383 true Scaffold1159: 1-5383 Arabidopsis halleri
Araha.1159s0001 5.0kb downstream 5.0kb downstream 973 false Scaffold1159: 1-973 Arabidopsis halleri
Araha.1159s0001 10.0kb upstream 10.0kb upstream 14410 true Scaffold1159: 974-15383 Arabidopsis halleri
Araha.1159s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1159: 5384-15383 Arabidopsis halleri
Araha.1159s0001 10.0kb downstream 10.0kb downstream 5383 true Scaffold1159: 1-5383 Arabidopsis halleri
Araha.1159s0001 10.0kb downstream 10.0kb downstream 973 false Scaffold1159: 1-973 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377658 5261 Brassicaceae View MSA
123829368 5264 Brassicales-Malvales View MSA
124344124 5266 SBM View MSA
124241673 5268 Malvidae View MSA
124068806 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain