Gene : Araha.1197s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF43 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  4
Name:  ? Araha.1197s0004 Secondary Identifier:  ? PAC:28852438
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5980 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1197s0004 0.5kb upstream 0.5kb upstream 3347 true Scaffold1197: 31304-34650 Arabidopsis halleri
Araha.1197s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1197: 31304-31803 Arabidopsis halleri
Araha.1197s0004 0.5kb downstream 0.5kb downstream 3347 true Scaffold1197: 31804-35150 Arabidopsis halleri
Araha.1197s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1197: 34651-35150 Arabidopsis halleri
Araha.1197s0004 1.0kb upstream 1.0kb upstream 3847 true Scaffold1197: 30804-34650 Arabidopsis halleri
Araha.1197s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1197: 30804-31803 Arabidopsis halleri
Araha.1197s0004 1.0kb downstream 1.0kb downstream 3847 true Scaffold1197: 31804-35650 Arabidopsis halleri
Araha.1197s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1197: 34651-35650 Arabidopsis halleri
Araha.1197s0004 2.0kb upstream 2.0kb upstream 4847 true Scaffold1197: 29804-34650 Arabidopsis halleri
Araha.1197s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1197: 29804-31803 Arabidopsis halleri
Araha.1197s0004 2.0kb downstream 2.0kb downstream 4847 true Scaffold1197: 31804-36650 Arabidopsis halleri
Araha.1197s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1197: 34651-36650 Arabidopsis halleri
Araha.1197s0004 5.0kb upstream 5.0kb upstream 7847 true Scaffold1197: 26804-34650 Arabidopsis halleri
Araha.1197s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1197: 26804-31803 Arabidopsis halleri
Araha.1197s0004 5.0kb downstream 5.0kb downstream 7847 true Scaffold1197: 31804-39650 Arabidopsis halleri
Araha.1197s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1197: 34651-39650 Arabidopsis halleri
Araha.1197s0004 10.0kb upstream 10.0kb upstream 12847 true Scaffold1197: 21804-34650 Arabidopsis halleri
Araha.1197s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1197: 21804-31803 Arabidopsis halleri
Araha.1197s0004 10.0kb downstream 10.0kb downstream 12847 true Scaffold1197: 31804-44650 Arabidopsis halleri
Araha.1197s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1197: 34651-44650 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368548 5261 Brassicaceae View MSA
123828903 5264 Brassicales-Malvales View MSA
124339349 5266 SBM View MSA
124238914 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain