Gene : Araha.1153s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR24326:SF196 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-16-RELATED Genomic Order:  1
Name:  ? Araha.1153s0001 Secondary Identifier:  ? PAC:28850793

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1153s0001 0.5kb upstream 0.5kb upstream 2053 true Scaffold1153: 1946-3998 Arabidopsis halleri
Araha.1153s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1153: 3499-3998 Arabidopsis halleri
Araha.1153s0001 0.5kb downstream 0.5kb downstream 2053 true Scaffold1153: 1446-3498 Arabidopsis halleri
Araha.1153s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1153: 1446-1945 Arabidopsis halleri
Araha.1153s0001 1.0kb upstream 1.0kb upstream 2553 true Scaffold1153: 1946-4498 Arabidopsis halleri
Araha.1153s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1153: 3499-4498 Arabidopsis halleri
Araha.1153s0001 1.0kb downstream 1.0kb downstream 2553 true Scaffold1153: 946-3498 Arabidopsis halleri
Araha.1153s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1153: 946-1945 Arabidopsis halleri
Araha.1153s0001 2.0kb upstream 2.0kb upstream 3553 true Scaffold1153: 1946-5498 Arabidopsis halleri
Araha.1153s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1153: 3499-5498 Arabidopsis halleri
Araha.1153s0001 2.0kb downstream 2.0kb downstream 3498 true Scaffold1153: 1-3498 Arabidopsis halleri
Araha.1153s0001 2.0kb downstream 2.0kb downstream 1945 false Scaffold1153: 1-1945 Arabidopsis halleri
Araha.1153s0001 5.0kb upstream 5.0kb upstream 6553 true Scaffold1153: 1946-8498 Arabidopsis halleri
Araha.1153s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1153: 3499-8498 Arabidopsis halleri
Araha.1153s0001 5.0kb downstream 5.0kb downstream 3498 true Scaffold1153: 1-3498 Arabidopsis halleri
Araha.1153s0001 5.0kb downstream 5.0kb downstream 1945 false Scaffold1153: 1-1945 Arabidopsis halleri
Araha.1153s0001 10.0kb upstream 10.0kb upstream 11553 true Scaffold1153: 1946-13498 Arabidopsis halleri
Araha.1153s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1153: 3499-13498 Arabidopsis halleri
Araha.1153s0001 10.0kb downstream 10.0kb downstream 3498 true Scaffold1153: 1-3498 Arabidopsis halleri
Araha.1153s0001 10.0kb downstream 10.0kb downstream 1945 false Scaffold1153: 1-1945 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366312 5261 Brassicaceae View MSA
123799148 5264 Brassicales-Malvales View MSA
124296697 5266 SBM View MSA
124253703 5268 Malvidae View MSA
124072423 5270 Rosid View MSA
123750844 5271 Pentapetalae View MSA
122791201 5272 Eudicot View MSA
122049195 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain