Gene : Araha.1682s0004 A. halleri v1.1

Defline:  (1 of 2) PTHR12214 - GC-RICH SEQUENCE DNA-BINDING FACTOR Genomic Order:  4
Name:  ? Araha.1682s0004 Secondary Identifier:  ? PAC:28846981

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1682s0004 0.5kb upstream 0.5kb upstream 4784 true Scaffold1682: 12313-17096 Arabidopsis halleri
Araha.1682s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1682: 16597-17096 Arabidopsis halleri
Araha.1682s0004 0.5kb downstream 0.5kb downstream 4784 true Scaffold1682: 11813-16596 Arabidopsis halleri
Araha.1682s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1682: 11813-12312 Arabidopsis halleri
Araha.1682s0004 1.0kb upstream 1.0kb upstream 5284 true Scaffold1682: 12313-17596 Arabidopsis halleri
Araha.1682s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1682: 16597-17596 Arabidopsis halleri
Araha.1682s0004 1.0kb downstream 1.0kb downstream 5284 true Scaffold1682: 11313-16596 Arabidopsis halleri
Araha.1682s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1682: 11313-12312 Arabidopsis halleri
Araha.1682s0004 2.0kb upstream 2.0kb upstream 6284 true Scaffold1682: 12313-18596 Arabidopsis halleri
Araha.1682s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1682: 16597-18596 Arabidopsis halleri
Araha.1682s0004 2.0kb downstream 2.0kb downstream 6284 true Scaffold1682: 10313-16596 Arabidopsis halleri
Araha.1682s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1682: 10313-12312 Arabidopsis halleri
Araha.1682s0004 5.0kb upstream 5.0kb upstream 9284 true Scaffold1682: 12313-21596 Arabidopsis halleri
Araha.1682s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1682: 16597-21596 Arabidopsis halleri
Araha.1682s0004 5.0kb downstream 5.0kb downstream 9284 true Scaffold1682: 7313-16596 Arabidopsis halleri
Araha.1682s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1682: 7313-12312 Arabidopsis halleri
Araha.1682s0004 10.0kb upstream 10.0kb upstream 14284 true Scaffold1682: 12313-26596 Arabidopsis halleri
Araha.1682s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1682: 16597-26596 Arabidopsis halleri
Araha.1682s0004 10.0kb downstream 10.0kb downstream 14284 true Scaffold1682: 2313-16596 Arabidopsis halleri
Araha.1682s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1682: 2313-12312 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375297 5261 Brassicaceae View MSA
123832392 5264 Brassicales-Malvales View MSA
124338727 5266 SBM View MSA
124240112 5268 Malvidae View MSA
124050258 5270 Rosid View MSA
123739930 5271 Pentapetalae View MSA
122786850 5272 Eudicot View MSA
122041525 5273 Angiosperm View MSA
121344112 5274 Embryophyte View MSA
123425379 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain