Gene : Araha.1871s0003 A. halleri v1.1

Defline:  (1 of 8) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  3
Name:  ? Araha.1871s0003 Secondary Identifier:  ? PAC:28840756

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1871s0003 0.5kb upstream 0.5kb upstream 996 true Scaffold1871: 21172-22167 Arabidopsis halleri
Araha.1871s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1871: 21172-21671 Arabidopsis halleri
Araha.1871s0003 0.5kb downstream 0.5kb downstream 996 true Scaffold1871: 21672-22667 Arabidopsis halleri
Araha.1871s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1871: 22168-22667 Arabidopsis halleri
Araha.1871s0003 1.0kb upstream 1.0kb upstream 1496 true Scaffold1871: 20672-22167 Arabidopsis halleri
Araha.1871s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1871: 20672-21671 Arabidopsis halleri
Araha.1871s0003 1.0kb downstream 1.0kb downstream 1496 true Scaffold1871: 21672-23167 Arabidopsis halleri
Araha.1871s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1871: 22168-23167 Arabidopsis halleri
Araha.1871s0003 2.0kb upstream 2.0kb upstream 2496 true Scaffold1871: 19672-22167 Arabidopsis halleri
Araha.1871s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1871: 19672-21671 Arabidopsis halleri
Araha.1871s0003 2.0kb downstream 2.0kb downstream 2496 true Scaffold1871: 21672-24167 Arabidopsis halleri
Araha.1871s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1871: 22168-24167 Arabidopsis halleri
Araha.1871s0003 5.0kb upstream 5.0kb upstream 5496 true Scaffold1871: 16672-22167 Arabidopsis halleri
Araha.1871s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1871: 16672-21671 Arabidopsis halleri
Araha.1871s0003 5.0kb downstream 5.0kb downstream 5496 true Scaffold1871: 21672-27167 Arabidopsis halleri
Araha.1871s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1871: 22168-27167 Arabidopsis halleri
Araha.1871s0003 10.0kb upstream 10.0kb upstream 10496 true Scaffold1871: 11672-22167 Arabidopsis halleri
Araha.1871s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1871: 11672-21671 Arabidopsis halleri
Araha.1871s0003 10.0kb downstream 10.0kb downstream 10496 true Scaffold1871: 21672-32167 Arabidopsis halleri
Araha.1871s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1871: 22168-32167 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328205 5261 Brassicaceae View MSA
123769577 5264 Brassicales-Malvales View MSA
124268134 5266 SBM View MSA
124244050 5268 Malvidae View MSA
124068431 5270 Rosid View MSA
123751387 5271 Pentapetalae View MSA
122796767 5272 Eudicot View MSA
122047033 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain