Gene : Araha.1975s0002 A. halleri v1.1
Defline:  (1 of 2) PTHR11685:SF119 - E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED Genomic Order:  2
Name:  ? Araha.1975s0002 Secondary Identifier:  ? PAC:28845021
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1975s0002 0.5kb upstream 0.5kb upstream 3445 true Scaffold1975: 2644-6088 Arabidopsis halleri
Araha.1975s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1975: 2644-3143 Arabidopsis halleri
Araha.1975s0002 0.5kb downstream 0.5kb downstream 3445 true Scaffold1975: 3144-6588 Arabidopsis halleri
Araha.1975s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1975: 6089-6588 Arabidopsis halleri
Araha.1975s0002 1.0kb upstream 1.0kb upstream 3945 true Scaffold1975: 2144-6088 Arabidopsis halleri
Araha.1975s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1975: 2144-3143 Arabidopsis halleri
Araha.1975s0002 1.0kb downstream 1.0kb downstream 3945 true Scaffold1975: 3144-7088 Arabidopsis halleri
Araha.1975s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1975: 6089-7088 Arabidopsis halleri
Araha.1975s0002 2.0kb upstream 2.0kb upstream 4945 true Scaffold1975: 1144-6088 Arabidopsis halleri
Araha.1975s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1975: 1144-3143 Arabidopsis halleri
Araha.1975s0002 2.0kb downstream 2.0kb downstream 4945 true Scaffold1975: 3144-8088 Arabidopsis halleri
Araha.1975s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1975: 6089-8088 Arabidopsis halleri
Araha.1975s0002 5.0kb upstream 5.0kb upstream 6088 true Scaffold1975: 1-6088 Arabidopsis halleri
Araha.1975s0002 5.0kb upstream 5.0kb upstream 3143 false Scaffold1975: 1-3143 Arabidopsis halleri
Araha.1975s0002 5.0kb downstream 5.0kb downstream 7945 true Scaffold1975: 3144-11088 Arabidopsis halleri
Araha.1975s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1975: 6089-11088 Arabidopsis halleri
Araha.1975s0002 10.0kb upstream 10.0kb upstream 6088 true Scaffold1975: 1-6088 Arabidopsis halleri
Araha.1975s0002 10.0kb upstream 10.0kb upstream 3143 false Scaffold1975: 1-3143 Arabidopsis halleri
Araha.1975s0002 10.0kb downstream 10.0kb downstream 12945 true Scaffold1975: 3144-16088 Arabidopsis halleri
Araha.1975s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1975: 6089-16088 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366411 5261 Brassicaceae View MSA
123837734 5264 Brassicales-Malvales View MSA
124338764 5266 SBM View MSA
124239816 5268 Malvidae View MSA
124064990 5270 Rosid View MSA
123740641 5271 Pentapetalae View MSA
122792906 5272 Eudicot View MSA
122046859 5273 Angiosperm View MSA
121343815 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain