Gene : Araha.2321s0003 A. halleri v1.1
Defline:  (1 of 2) PTHR12181:SF12 - PROTEIN LPIN-1 Genomic Order:  3
Name:  ? Araha.2321s0003 Secondary Identifier:  ? PAC:28862616
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRIGLSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2321s0003 0.5kb upstream 0.5kb upstream 5170 true Scaffold2321: 5672-10841 Arabidopsis halleri
Araha.2321s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2321: 5672-6171 Arabidopsis halleri
Araha.2321s0003 0.5kb downstream 0.5kb downstream 5170 true Scaffold2321: 6172-11341 Arabidopsis halleri
Araha.2321s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2321: 10842-11341 Arabidopsis halleri
Araha.2321s0003 1.0kb upstream 1.0kb upstream 5670 true Scaffold2321: 5172-10841 Arabidopsis halleri
Araha.2321s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2321: 5172-6171 Arabidopsis halleri
Araha.2321s0003 1.0kb downstream 1.0kb downstream 5670 true Scaffold2321: 6172-11841 Arabidopsis halleri
Araha.2321s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2321: 10842-11841 Arabidopsis halleri
Araha.2321s0003 2.0kb upstream 2.0kb upstream 6670 true Scaffold2321: 4172-10841 Arabidopsis halleri
Araha.2321s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2321: 4172-6171 Arabidopsis halleri
Araha.2321s0003 2.0kb downstream 2.0kb downstream 6670 true Scaffold2321: 6172-12841 Arabidopsis halleri
Araha.2321s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2321: 10842-12841 Arabidopsis halleri
Araha.2321s0003 5.0kb upstream 5.0kb upstream 9670 true Scaffold2321: 1172-10841 Arabidopsis halleri
Araha.2321s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2321: 1172-6171 Arabidopsis halleri
Araha.2321s0003 5.0kb downstream 5.0kb downstream 9670 true Scaffold2321: 6172-15841 Arabidopsis halleri
Araha.2321s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2321: 10842-15841 Arabidopsis halleri
Araha.2321s0003 10.0kb upstream 10.0kb upstream 10841 true Scaffold2321: 1-10841 Arabidopsis halleri
Araha.2321s0003 10.0kb upstream 10.0kb upstream 6171 false Scaffold2321: 1-6171 Arabidopsis halleri
Araha.2321s0003 10.0kb downstream 10.0kb downstream 14670 true Scaffold2321: 6172-20841 Arabidopsis halleri
Araha.2321s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2321: 10842-20841 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366067 5261 Brassicaceae View MSA
123839656 5264 Brassicales-Malvales View MSA
124322631 5266 SBM View MSA
124248073 5268 Malvidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain