Gene : Araha.2360s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR11709:SF116 - LACCASE-11 Genomic Order:  4
Name:  ? Araha.2360s0004 Secondary Identifier:  ? PAC:28853141
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5466 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2360s0004 0.5kb upstream 0.5kb upstream 3255 true Scaffold2360: 13909-17163 Arabidopsis halleri
Araha.2360s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2360: 16664-17163 Arabidopsis halleri
Araha.2360s0004 0.5kb downstream 0.5kb downstream 3255 true Scaffold2360: 13409-16663 Arabidopsis halleri
Araha.2360s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2360: 13409-13908 Arabidopsis halleri
Araha.2360s0004 1.0kb upstream 1.0kb upstream 3755 true Scaffold2360: 13909-17663 Arabidopsis halleri
Araha.2360s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2360: 16664-17663 Arabidopsis halleri
Araha.2360s0004 1.0kb downstream 1.0kb downstream 3755 true Scaffold2360: 12909-16663 Arabidopsis halleri
Araha.2360s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2360: 12909-13908 Arabidopsis halleri
Araha.2360s0004 2.0kb upstream 2.0kb upstream 3904 true Scaffold2360: 13909-17812 Arabidopsis halleri
Araha.2360s0004 2.0kb upstream 2.0kb upstream 1149 false Scaffold2360: 16664-17812 Arabidopsis halleri
Araha.2360s0004 2.0kb downstream 2.0kb downstream 4755 true Scaffold2360: 11909-16663 Arabidopsis halleri
Araha.2360s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2360: 11909-13908 Arabidopsis halleri
Araha.2360s0004 5.0kb upstream 5.0kb upstream 3904 true Scaffold2360: 13909-17812 Arabidopsis halleri
Araha.2360s0004 5.0kb upstream 5.0kb upstream 1149 false Scaffold2360: 16664-17812 Arabidopsis halleri
Araha.2360s0004 5.0kb downstream 5.0kb downstream 7755 true Scaffold2360: 8909-16663 Arabidopsis halleri
Araha.2360s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2360: 8909-13908 Arabidopsis halleri
Araha.2360s0004 10.0kb upstream 10.0kb upstream 3904 true Scaffold2360: 13909-17812 Arabidopsis halleri
Araha.2360s0004 10.0kb upstream 10.0kb upstream 1149 false Scaffold2360: 16664-17812 Arabidopsis halleri
Araha.2360s0004 10.0kb downstream 10.0kb downstream 12755 true Scaffold2360: 3909-16663 Arabidopsis halleri
Araha.2360s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2360: 3909-13908 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367508 5261 Brassicaceae View MSA
123835573 5264 Brassicales-Malvales View MSA
124350795 5266 SBM View MSA
124249575 5268 Malvidae View MSA
124072546 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain