Gene : Araha.2292s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR11514:SF43 - TRANSCRIPTION FACTOR MYC3-RELATED Genomic Order:  1
Name:  ? Araha.2292s0001 Secondary Identifier:  ? PAC:28840665

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2292s0001 0.5kb upstream 0.5kb upstream 2438 true Scaffold2292: 763-3200 Arabidopsis halleri
Araha.2292s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2292: 2701-3200 Arabidopsis halleri
Araha.2292s0001 0.5kb downstream 0.5kb downstream 2438 true Scaffold2292: 263-2700 Arabidopsis halleri
Araha.2292s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2292: 263-762 Arabidopsis halleri
Araha.2292s0001 1.0kb upstream 1.0kb upstream 2938 true Scaffold2292: 763-3700 Arabidopsis halleri
Araha.2292s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2292: 2701-3700 Arabidopsis halleri
Araha.2292s0001 1.0kb downstream 1.0kb downstream 2700 true Scaffold2292: 1-2700 Arabidopsis halleri
Araha.2292s0001 1.0kb downstream 1.0kb downstream 762 false Scaffold2292: 1-762 Arabidopsis halleri
Araha.2292s0001 2.0kb upstream 2.0kb upstream 3938 true Scaffold2292: 763-4700 Arabidopsis halleri
Araha.2292s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2292: 2701-4700 Arabidopsis halleri
Araha.2292s0001 2.0kb downstream 2.0kb downstream 2700 true Scaffold2292: 1-2700 Arabidopsis halleri
Araha.2292s0001 2.0kb downstream 2.0kb downstream 762 false Scaffold2292: 1-762 Arabidopsis halleri
Araha.2292s0001 5.0kb upstream 5.0kb upstream 6938 true Scaffold2292: 763-7700 Arabidopsis halleri
Araha.2292s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2292: 2701-7700 Arabidopsis halleri
Araha.2292s0001 5.0kb downstream 5.0kb downstream 2700 true Scaffold2292: 1-2700 Arabidopsis halleri
Araha.2292s0001 5.0kb downstream 5.0kb downstream 762 false Scaffold2292: 1-762 Arabidopsis halleri
Araha.2292s0001 10.0kb upstream 10.0kb upstream 11938 true Scaffold2292: 763-12700 Arabidopsis halleri
Araha.2292s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold2292: 2701-12700 Arabidopsis halleri
Araha.2292s0001 10.0kb downstream 10.0kb downstream 2700 true Scaffold2292: 1-2700 Arabidopsis halleri
Araha.2292s0001 10.0kb downstream 10.0kb downstream 762 false Scaffold2292: 1-762 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374845 5261 Brassicaceae View MSA
123836431 5264 Brassicales-Malvales View MSA
124322162 5266 SBM View MSA
124169090 5268 Malvidae View MSA
124072195 5270 Rosid View MSA
123752263 5271 Pentapetalae View MSA
122797148 5272 Eudicot View MSA
122048135 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain