Gene : Araha.2852s0001 A. halleri v1.1

Defline:  (1 of 5) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Genomic Order:  1
Name:  ? Araha.2852s0001 Secondary Identifier:  ? PAC:28842717

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2852s0001 0.5kb upstream 0.5kb upstream 4385 true Scaffold2852: 2065-6449 Arabidopsis halleri
Araha.2852s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2852: 2065-2564 Arabidopsis halleri
Araha.2852s0001 0.5kb downstream 0.5kb downstream 4385 true Scaffold2852: 2565-6949 Arabidopsis halleri
Araha.2852s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2852: 6450-6949 Arabidopsis halleri
Araha.2852s0001 1.0kb upstream 1.0kb upstream 4885 true Scaffold2852: 1565-6449 Arabidopsis halleri
Araha.2852s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2852: 1565-2564 Arabidopsis halleri
Araha.2852s0001 1.0kb downstream 1.0kb downstream 4885 true Scaffold2852: 2565-7449 Arabidopsis halleri
Araha.2852s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2852: 6450-7449 Arabidopsis halleri
Araha.2852s0001 2.0kb upstream 2.0kb upstream 5885 true Scaffold2852: 565-6449 Arabidopsis halleri
Araha.2852s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2852: 565-2564 Arabidopsis halleri
Araha.2852s0001 2.0kb downstream 2.0kb downstream 5885 true Scaffold2852: 2565-8449 Arabidopsis halleri
Araha.2852s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2852: 6450-8449 Arabidopsis halleri
Araha.2852s0001 5.0kb upstream 5.0kb upstream 6449 true Scaffold2852: 1-6449 Arabidopsis halleri
Araha.2852s0001 5.0kb upstream 5.0kb upstream 2564 false Scaffold2852: 1-2564 Arabidopsis halleri
Araha.2852s0001 5.0kb downstream 5.0kb downstream 8885 true Scaffold2852: 2565-11449 Arabidopsis halleri
Araha.2852s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2852: 6450-11449 Arabidopsis halleri
Araha.2852s0001 10.0kb upstream 10.0kb upstream 6449 true Scaffold2852: 1-6449 Arabidopsis halleri
Araha.2852s0001 10.0kb upstream 10.0kb upstream 2564 false Scaffold2852: 1-2564 Arabidopsis halleri
Araha.2852s0001 10.0kb downstream 10.0kb downstream 11708 true Scaffold2852: 2565-14272 Arabidopsis halleri
Araha.2852s0001 10.0kb downstream 10.0kb downstream 7823 false Scaffold2852: 6450-14272 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369712 5261 Brassicaceae View MSA
123841459 5264 Brassicales-Malvales View MSA
124345367 5266 SBM View MSA
124249647 5268 Malvidae View MSA
124070544 5270 Rosid View MSA
123741893 5271 Pentapetalae View MSA
122797353 5272 Eudicot View MSA
122046831 5273 Angiosperm View MSA
121349622 5274 Embryophyte View MSA
123428043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain