Protein Family : polyadenylate-binding protein, putative, expressed 123428043

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  226

226 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
101161 (1 of 4) PF00658 - Poly-adenylate binding protein, unique domain (PABP) S. moellendorffii v1.0 2401   scaffold_24: 947845-950245
21095 (1 of 4) PF00658 - Poly-adenylate binding protein, unique domain (PABP) S. moellendorffii v1.0 2380   scaffold_0: 2126200-2128579
29801.t000097 (1 of 8) K13126 - polyadenylate-binding protein (PABPC) R. communis v0.1 5388   29801: 535776-541163
30170.t000259 (1 of 8) K13126 - polyadenylate-binding protein (PABPC) R. communis v0.1 4690   30170: 1306435-1311124
28644.t000011 (1 of 1) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) R. communis v0.1 3181   28644: 48908-52088
Cucsa.364050 (1 of 4) KOG0123 - Polyadenylate-binding protein (RRM superfamily) C. sativus v1.0 3163   scaffold03611: 1612318-1615480
Cucsa.244510 (1 of 4) KOG0123 - Polyadenylate-binding protein (RRM superfamily) C. sativus v1.0 5378   scaffold02135: 362467-367844
orange1.1g006290m.g (1 of 4) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) C. sinensis v1.1 4795   scaffold00006: 1442229-1447023
orange1.1g010577m.g (1 of 7) KOG0123 - Polyadenylate-binding protein (RRM superfamily) C. sinensis v1.1 4467   scaffold00065: 332819-337285
orange1.1g006641m.g (1 of 4) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) C. sinensis v1.1 3063   scaffold00002: 1117979-1121041
orange1.1g006282m.g (1 of 4) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) C. sinensis v1.1 4099   scaffold00002: 1929495-1933593
AT4G34110 (1 of 4) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED A. thaliana TAIR10 PAB2 3712   Chr4: 16336387-16340098
AT1G22760 (1 of 4) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED A. thaliana TAIR10 PAB3 3691   Chr1: 8055325-8059015
AT1G49760 (1 of 4) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED A. thaliana TAIR10 PAB8 3610   Chr1: 18416474-18420083
AT1G71770 (1 of 9) K13126 - polyadenylate-binding protein (PABPC) A. thaliana TAIR10 PAB5 3735   Chr1: 26990525-26994259
AT2G23350 (1 of 4) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED A. thaliana TAIR10 PAB4 3217   Chr2: 9943053-9946269
Thhalv10024683m.g (1 of 5) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED E. salsugineum v1.0 3602   scaffold_1: 2526716-2530317
Thhalv10022589m.g (1 of 5) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED E. salsugineum v1.0 4279   scaffold_11: 5887538-5891816
Thhalv10000075m.g (1 of 5) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED E. salsugineum v1.0 3298   scaffold_15: 1858757-1862054
Thhalv10011289m.g (1 of 5) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED E. salsugineum v1.0 3709   scaffold_7: 3372814-3376522
Thhalv10018219m.g (1 of 6) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) E. salsugineum v1.0 2690   scaffold_9: 3911076-3913765
Ciclev10003530m.g (1 of 6) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) C. clementina v1.0 3065   scaffold_5: 39158907-39161971
Ciclev10000537m.g (1 of 6) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) C. clementina v1.0 4036   scaffold_5: 39992234-39996269
Ciclev10027999m.g (1 of 6) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) C. clementina v1.0 5278   scaffold_8: 2831832-2837109
Ciclev10025109m.g (1 of 6) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) C. clementina v1.0 4788   scaffold_7: 3446799-3451586
Lus10027886.g (1 of 9) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) L. usitatissimum v1.0 3519   scaffold1143: 784915-788433
Lus10010042.g (1 of 9) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) L. usitatissimum v1.0 3735   scaffold621: 103791-107525
Lus10010370.g (1 of 9) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) L. usitatissimum v1.0 3803   scaffold740: 205121-208923
Lus10002835.g (1 of 9) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) L. usitatissimum v1.0 3558   scaffold810: 120809-124366
Gorai.002G134900 (1 of 10) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) G. raimondii v2.1 4615   Chr02: 21739123-21743737

226 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
21095 S. moellendorffii v1.0 123428043 polyadenylate-binding protein, putative, expressed 2 5275 Viridiplantae
101161 S. moellendorffii v1.0 123428043 polyadenylate-binding protein, putative, expressed 2 5275 Viridiplantae
29801.m003152 R. communis v0.1 123428043 polyadenylate-binding protein, putative, expressed 3 5275 Viridiplantae
30170.m013847 R. communis v0.1 123428043 polyadenylate-binding protein, putative, expressed 3 5275 Viridiplantae
28644.m000904 R. communis v0.1 123428043 polyadenylate-binding protein, putative, expressed 3 5275 Viridiplantae
Cucsa.364050.1 C. sativus v1.0 123428043 polyadenylate-binding protein, putative, expressed 2 5275 Viridiplantae
Cucsa.244510.1 C. sativus v1.0 123428043 polyadenylate-binding protein, putative, expressed 2 5275 Viridiplantae
orange1.1g006290m C. sinensis v1.1 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
orange1.1g010577m C. sinensis v1.1 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
orange1.1g006641m C. sinensis v1.1 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
orange1.1g006282m C. sinensis v1.1 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
AT4G34110.1 A. thaliana TAIR10 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
AT1G22760.1 A. thaliana TAIR10 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
AT1G49760.1 A. thaliana TAIR10 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
AT1G71770.1 A. thaliana TAIR10 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
AT2G23350.1 A. thaliana TAIR10 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
Thhalv10024683m E. salsugineum v1.0 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
Thhalv10022589m E. salsugineum v1.0 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
Thhalv10000075m E. salsugineum v1.0 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
Thhalv10011289m E. salsugineum v1.0 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
Thhalv10018219m E. salsugineum v1.0 123428043 polyadenylate-binding protein, putative, expressed 5 5275 Viridiplantae
Ciclev10003530m C. clementina v1.0 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
Ciclev10000537m C. clementina v1.0 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
Ciclev10027999m C. clementina v1.0 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
Ciclev10025109m C. clementina v1.0 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
Lus10010042 L. usitatissimum v1.0 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
Lus10010370 L. usitatissimum v1.0 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
Lus10027886 L. usitatissimum v1.0 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
Lus10002835 L. usitatissimum v1.0 123428043 polyadenylate-binding protein, putative, expressed 4 5275 Viridiplantae
Gorai.002G134900.1 G. raimondii v2.1 123428043 polyadenylate-binding protein, putative, expressed 6 5275 Viridiplantae