Gene : PAB8 A. thaliana TAIR10
Primary Identifier:  ? AT1G49760 Defline:  (1 of 4) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED
Genomic Order:  4002 Name:  ? AT1G49760
Secondary Identifier:  ? PAC:19654865
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49760 0.5kb upstream 0.5kb upstream 4110 true Chr1: 18415974-18420083 Arabidopsis thaliana
AT1G49760 0.5kb upstream 0.5kb upstream 500 false Chr1: 18415974-18416473 Arabidopsis thaliana
AT1G49760 0.5kb downstream 0.5kb downstream 4110 true Chr1: 18416474-18420583 Arabidopsis thaliana
AT1G49760 0.5kb downstream 0.5kb downstream 500 false Chr1: 18420084-18420583 Arabidopsis thaliana
AT1G49760 1.0kb upstream 1.0kb upstream 4610 true Chr1: 18415474-18420083 Arabidopsis thaliana
AT1G49760 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18415474-18416473 Arabidopsis thaliana
AT1G49760 1.0kb downstream 1.0kb downstream 4610 true Chr1: 18416474-18421083 Arabidopsis thaliana
AT1G49760 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18420084-18421083 Arabidopsis thaliana
AT1G49760 2.0kb upstream 2.0kb upstream 5610 true Chr1: 18414474-18420083 Arabidopsis thaliana
AT1G49760 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18414474-18416473 Arabidopsis thaliana
AT1G49760 2.0kb downstream 2.0kb downstream 5610 true Chr1: 18416474-18422083 Arabidopsis thaliana
AT1G49760 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18420084-18422083 Arabidopsis thaliana
AT1G49760 5.0kb upstream 5.0kb upstream 8610 true Chr1: 18411474-18420083 Arabidopsis thaliana
AT1G49760 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18411474-18416473 Arabidopsis thaliana
AT1G49760 5.0kb downstream 5.0kb downstream 8610 true Chr1: 18416474-18425083 Arabidopsis thaliana
AT1G49760 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18420084-18425083 Arabidopsis thaliana
AT1G49760 10.0kb upstream 10.0kb upstream 13610 true Chr1: 18406474-18420083 Arabidopsis thaliana
AT1G49760 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18406474-18416473 Arabidopsis thaliana
AT1G49760 10.0kb downstream 10.0kb downstream 13610 true Chr1: 18416474-18430083 Arabidopsis thaliana
AT1G49760 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18420084-18430083 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363500 5261 Brassicaceae View MSA
123841459 5264 Brassicales-Malvales View MSA
124345367 5266 SBM View MSA
124249647 5268 Malvidae View MSA
124070544 5270 Rosid View MSA
123741893 5271 Pentapetalae View MSA
122797353 5272 Eudicot View MSA
122046831 5273 Angiosperm View MSA
121349622 5274 Embryophyte View MSA
123428043 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.043       Low
cufflinks 32.016     High  
cufflinks 18.359        
cufflinks 31.406     High  
cufflinks 14.588       Low
cufflinks 31.82     High  

0 Strain