Gene : Araha.3034s0022 A. halleri v1.1
Defline:  (1 of 6) PTHR31736:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN-RELATED Genomic Order:  22
Name:  ? Araha.3034s0022 Secondary Identifier:  ? PAC:28841346
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3034s0022 0.5kb upstream 0.5kb upstream 2840 true Scaffold3034: 81325-84164 Arabidopsis halleri
Araha.3034s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold3034: 81325-81824 Arabidopsis halleri
Araha.3034s0022 0.5kb downstream 0.5kb downstream 2840 true Scaffold3034: 81825-84664 Arabidopsis halleri
Araha.3034s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold3034: 84165-84664 Arabidopsis halleri
Araha.3034s0022 1.0kb upstream 1.0kb upstream 3340 true Scaffold3034: 80825-84164 Arabidopsis halleri
Araha.3034s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold3034: 80825-81824 Arabidopsis halleri
Araha.3034s0022 1.0kb downstream 1.0kb downstream 3340 true Scaffold3034: 81825-85164 Arabidopsis halleri
Araha.3034s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold3034: 84165-85164 Arabidopsis halleri
Araha.3034s0022 2.0kb upstream 2.0kb upstream 4340 true Scaffold3034: 79825-84164 Arabidopsis halleri
Araha.3034s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold3034: 79825-81824 Arabidopsis halleri
Araha.3034s0022 2.0kb downstream 2.0kb downstream 4340 true Scaffold3034: 81825-86164 Arabidopsis halleri
Araha.3034s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold3034: 84165-86164 Arabidopsis halleri
Araha.3034s0022 5.0kb upstream 5.0kb upstream 7340 true Scaffold3034: 76825-84164 Arabidopsis halleri
Araha.3034s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold3034: 76825-81824 Arabidopsis halleri
Araha.3034s0022 5.0kb downstream 5.0kb downstream 7340 true Scaffold3034: 81825-89164 Arabidopsis halleri
Araha.3034s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold3034: 84165-89164 Arabidopsis halleri
Araha.3034s0022 10.0kb upstream 10.0kb upstream 12340 true Scaffold3034: 71825-84164 Arabidopsis halleri
Araha.3034s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold3034: 71825-81824 Arabidopsis halleri
Araha.3034s0022 10.0kb downstream 10.0kb downstream 12340 true Scaffold3034: 81825-94164 Arabidopsis halleri
Araha.3034s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold3034: 84165-94164 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374299 5261 Brassicaceae View MSA
123841125 5264 Brassicales-Malvales View MSA
124351120 5266 SBM View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain