Gene : Araha.3133s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR31852:SF48 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  3
Name:  ? Araha.3133s0003 Secondary Identifier:  ? PAC:28858015

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3133s0003 0.5kb upstream 0.5kb upstream 1220 true Scaffold3133: 9143-10362 Arabidopsis halleri
Araha.3133s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3133: 9863-10362 Arabidopsis halleri
Araha.3133s0003 0.5kb downstream 0.5kb downstream 1220 true Scaffold3133: 8643-9862 Arabidopsis halleri
Araha.3133s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3133: 8643-9142 Arabidopsis halleri
Araha.3133s0003 1.0kb upstream 1.0kb upstream 1720 true Scaffold3133: 9143-10862 Arabidopsis halleri
Araha.3133s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3133: 9863-10862 Arabidopsis halleri
Araha.3133s0003 1.0kb downstream 1.0kb downstream 1720 true Scaffold3133: 8143-9862 Arabidopsis halleri
Araha.3133s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3133: 8143-9142 Arabidopsis halleri
Araha.3133s0003 2.0kb upstream 2.0kb upstream 2720 true Scaffold3133: 9143-11862 Arabidopsis halleri
Araha.3133s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3133: 9863-11862 Arabidopsis halleri
Araha.3133s0003 2.0kb downstream 2.0kb downstream 2720 true Scaffold3133: 7143-9862 Arabidopsis halleri
Araha.3133s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3133: 7143-9142 Arabidopsis halleri
Araha.3133s0003 5.0kb upstream 5.0kb upstream 5720 true Scaffold3133: 9143-14862 Arabidopsis halleri
Araha.3133s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3133: 9863-14862 Arabidopsis halleri
Araha.3133s0003 5.0kb downstream 5.0kb downstream 5720 true Scaffold3133: 4143-9862 Arabidopsis halleri
Araha.3133s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3133: 4143-9142 Arabidopsis halleri
Araha.3133s0003 10.0kb upstream 10.0kb upstream 10720 true Scaffold3133: 9143-19862 Arabidopsis halleri
Araha.3133s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3133: 9863-19862 Arabidopsis halleri
Araha.3133s0003 10.0kb downstream 10.0kb downstream 9862 true Scaffold3133: 1-9862 Arabidopsis halleri
Araha.3133s0003 10.0kb downstream 10.0kb downstream 9142 false Scaffold3133: 1-9142 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361777 5261 Brassicaceae View MSA
123835991 5264 Brassicales-Malvales View MSA
124341177 5266 SBM View MSA
124239946 5268 Malvidae View MSA
124070959 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain